Rewriting surfaces and boundaries

This commit is contained in:
Jorge Gonzalez 2026-02-19 20:23:13 +01:00
commit 1b32dfdfd6
6 changed files with 170 additions and 152 deletions

View file

@ -48,6 +48,8 @@ MODULE moduleInput
CALL readBoundaryEM(config)
CALL checkStatus(config, "readBoundaryEM")
! Read Physical Surfaces
!Read Geometry
CALL verboseError('Reading Geometry...')
CALL readGeometry(config)
@ -812,28 +814,120 @@ MODULE moduleInput
END DO
! Link physical surfaces to boundaries
call config%info('boundaries.particles.linking', found, n_children = nPhysicalSurfaces)
allocate(boundaryParticlesLinking(1:nPhysicalSurfaces))
allocate(speciesNames(1:nSpecies))
do b = 1, nPhysicalSurfaces
write(iString, '(i2)') b
object = 'boundary.particles.linking(' // trim(iString) // ')'
call config%get(object // '.physicalSurface', boundaryParticlesLinking(b)%physicalSurface, found)
call config%get(object // '.model', speciesNames, found)
allocate(boundaryParticlesLinking(b)%speciesIndex(1:nSpecies))
do s = 1, nSpecies
boundaryParticlesLinking(b)%speciesIndex(s) = boundaryParticlesName_to_Index(speciesNames(s))
end do
end do
!Init the list of particles from surfaces
CALL OMP_INIT_LOCK(partSurfaces%lock)
END SUBROUTINE readBoundaryParticle
SUBROUTINE readBoundaryEM(config)
USE moduleMesh
USE moduleOutput
USE moduleErrors
USE moduleEM
USE moduleSpecies
USE json_module
IMPLICIT NONE
TYPE(json_file), INTENT(inout):: config
CHARACTER(:), ALLOCATABLE:: object
LOGICAL:: found
INTEGER:: b
CHARACTER(2):: bString
character(len=100), allocatable:: modelName(:)
CALL config%info('boundaries.EM.models', found, n_children = nBoundariesEM)
IF (found) THEN
ALLOCATE(boundariesEM(1:nBoundariesEM))
END IF
do b = 1, nBoundaryEM
write(bString, '(I2)') b
object = 'boundaries.EM.models(' // TRIM(bString) // ')'
call boundariesEM(b)%init(config, object, b)
end do
! TODO: Move this to the init of species
ALLOCATE(qSpecies(1:nSpecies))
DO s = 1, nSpecies
SELECT TYPE(sp => species(s)%obj)
TYPE IS (speciesCharged)
qSpecies(s) = sp%q
CLASS DEFAULT
qSpecies(s) = 0.D0
END SELECT
END DO
END SUBROUTINE readBoundaryEM
subroutine readPhysicalSurfaces(config)
use json_module
use moduleMesh
use moduleErrors
implicit none
type(json_file), intent(inout):: config
character(:), allocatable:: object
logical:: found
integer:: ps
character(2):: psString
integer:: nParticleModels
character(len=100), allocatable:: particleModels(:)
character(len=100):: EMModel
integer:: s, boundaryIndex
call config%info('physicalSurfaces', found, n_children = nPhysicalSurfaces)
if (found) then
allocate(physicalSurfaces(1:nPhysicalSurfaces))
else
call criticalError('No physical surfaces found in the input file', 'readPhysicalSurfaces')
end if
do ps = 1, nPhysicalSurfaces
write(ps, '(I2)') ps
object = 'physicalSurfaces(' // TRIM(bString) // ')'
call config%get(object // '.index', physicalSurfaces(ps)%index, found)
if (.not. found) then
call criticalError('Physical surface index not found', 'readPhysicalSurfaces')
end if
! Link models for particles
call config%info(object // '.particles', found, n_children = nParticleModels)
if ((.not. found) .or. &
(nParticleModels /= nSpecies)) then
call criticalError('Not enough models for particles provided', 'readPhysicalSurfaces')
end if
call config%get(object // '.particles', particleModels, found)
allocate(physicalSurfaces(ps)%particles(1:nSpecies))
do s = 1, nSpecies
boundaryIndex = boundaryParticlesName_to_Index(particleModels(s))
physicalSurfaces(ps)%particles(s)%obj => boundaryParticles(boundaryIndex)%obj
end do
! Link electromagnetic boundary condition
call config%get(object // '.EM', EMModel, found)
if (found) then
bouondaryIndex = boundaryEMName_to_Index(EMModel)
physicalSurfaces(ps)%EM => boundariesEM(boundaryIndex)%obj
end if
end do
end subroutine readPhysicalSurfaces
!Read the geometry (mesh) for the case
SUBROUTINE readGeometry(config)
USE moduleMesh
@ -1081,66 +1175,6 @@ MODULE moduleInput
END SUBROUTINE readProbes
SUBROUTINE readBoundaryEM(config)
USE moduleMesh
USE moduleOutput
USE moduleErrors
USE moduleEM
USE moduleSpecies
USE json_module
IMPLICIT NONE
TYPE(json_file), INTENT(inout):: config
CHARACTER(:), ALLOCATABLE:: object
LOGICAL:: found
INTEGER:: b
CHARACTER(2):: bString
character(len=100), allocatable:: modelName(:)
CALL config%info('boundaries.EM.models', found, n_children = nBoundariesEM)
IF (found) THEN
ALLOCATE(boundariesEM(1:nBoundariesEM))
END IF
do b = 1, nBoundaryEM
write(bString, '(I2)') b
object = 'boundaries.EM.models(' // TRIM(bString) // ')'
call boundariesEM(b)%init(config, object, b)
end do
! Link physical surfaces to boundaries
call config%info('boundaries.EM.linking', found, n_children = nPhysicalSurfaces)
allocate(boundaryEMLinking(1:nPhysicalSurfaces))
allocate(speciesNames(1:nSpecies))
do b = 1, nPhysicalSurfaces
write(iString, '(i2)') b
object = 'boundary.EM.linking(' // trim(iString) // ')'
call config%get(object // '.physicalSurface', boundaryEMLinking(b)%physicalSurface, found)
call config%get(object // '.model', modelName, found)
boundaryEMLinking(b)%model => boundariesEM(boundaryEMName_to_Index(modelName(s)))%obj
end do
! TODO: Move this to the init of species
ALLOCATE(qSpecies(1:nSpecies))
DO s = 1, nSpecies
SELECT TYPE(sp => species(s)%obj)
TYPE IS (speciesCharged)
qSpecies(s) = sp%q
CLASS DEFAULT
qSpecies(s) = 0.D0
END SELECT
END DO
END SUBROUTINE readBoundaryEM
!Reads the injection of particles from the boundaries
SUBROUTINE readInject(config)
USE moduleSpecies