Reading of mesh files has been made independent from geometry and

prepared to accept different formats.
This commit is contained in:
Jorge Gonzalez 2021-03-29 09:45:51 +02:00
commit 3f91d9e1ed
31 changed files with 2377 additions and 2675 deletions

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@ -15,7 +15,7 @@
},
"geometry": {
"type": "1DCart",
"meshType": "gmsh",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [

View file

@ -15,7 +15,7 @@
},
"geometry": {
"type": "1DRad",
"meshType": "gmsh",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [

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@ -0,0 +1,76 @@
{
"output": {
"path": "./runs/ALPHIE_Grid/",
"triggerOutput": 500,
"cpuTime": false,
"numColl": false,
"EMField": true,
"folder": "base_case"
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [
{"name": "Argon+", "type": "charged", "mass": 6.633e-26, "charge": 1.0, "weight": 1.0e1},
{"name": "Electron", "type": "charged", "mass": 9.109e-31, "charge":-1.0, "weight": 1.0e2}
],
"boundary": [
{"name": "Ionization Chanber", "physicalSurface": 1, "bTypes": [
{"type": "transparent"},
{"type": "transparent"}
]},
{"name": "Vacuum Chamber", "physicalSurface": 2, "bTypes": [
{"type": "transparent"},
{"type": "transparent"}
]},
{"name": "Exterior", "physicalSurface": 3, "bTypes": [
{"type": "reflection"},
{"type": "reflection"}
]},
{"name": "Grid Extraction", "physicalSurface": 4, "bTypes": [
{"type": "absorption"},
{"type": "absorption"}
]},
{"name": "Grid Acceleration", "physicalSurface": 5, "bTypes": [
{"type": "absorption"},
{"type": "absorption"}
]},
{"name": "Axis", "physicalSurface": 6, "bTypes": [
{"type": "axis"},
{"type": "axis"}
]}
],
"boundaryEM": [
{"name": "Extraction Grid", "type": "dirichlet", "potential": -150.0, "physicalSurface": 4},
{"name": "Acceleration Grid", "type": "dirichlet", "potential": -600.0, "physicalSurface": 5},
{"name": "Ionization Chamber", "type": "dirichlet", "potential": 0.0, "physicalSurface": 1}
],
"inject": [
{"name": "Ionization Argon+", "species": "Argon+", "flow": 27.0e-6, "units": "A", "v": 322.0, "T": [ 500.0, 500.0, 500.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [ 1, 0, 0], "physicalSurface": 1},
{"name": "Ionization Electron", "species": "Electron", "flow": 27.0e-6, "units": "A", "v": 87000.0, "T": [ 500.0, 500.0, 500.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [ 1, 0, 0], "physicalSurface": 1},
{"name": "Cathode Electron", "species": "Electron", "flow": 9.0e-5, "units": "A", "v": 87000.0, "T": [2500.0, 2500.0, 2500.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [-1, 0, 0], "physicalSurface": 2}
],
"reference": {
"density": 1.0e16,
"mass": 9.109e-31,
"temperature": 2500.0,
"radius": 1.88e-10
},
"case": {
"tau": [1.0e-9, 1.0e-11],
"time": 1.0e-6,
"pusher": ["2DCylCharged", "2DCylCharged"],
"WeightingScheme": "Volume",
"EMSolver": "Electrostatic"
},
"parallel": {
"OpenMP":{
"nThreads": 24
}
}
}

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@ -0,0 +1,73 @@
{
"output": {
"path": "./runs/ALPHIE_Grid/",
"triggerOutput": 500,
"cpuTime": false,
"numColl": false,
"EMField": true,
"folder": "ionization_0.10mA"
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [
{"name": "Argon+", "type": "charged", "mass": 6.633e-26, "charge": 1.0, "weight": 1.0e1},
{"name": "Electron", "type": "charged", "mass": 9.109e-31, "charge":-1.0, "weight": 1.0e2}
],
"boundary": [
{"name": "Ionization Chanber", "physicalSurface": 1, "bTypes": [
{"type": "transparent"},
{"type": "ionization", "neutral": {"ion": "Argon+", "mass": 6.633e-26, "density": 1.0e17, "velocity": [323, 0, 0], "temperature": 300},
"effectiveTime": 5.0e-6,"energyThreshold": 15.76, "crossSection": "./data/collisions/IO_e-Ar.dat"}
]},
{"name": "Vacuum Chamber", "physicalSurface": 2, "bTypes": [
{"type": "transparent"},
{"type": "transparent"}
]},
{"name": "Exterior", "physicalSurface": 3, "bTypes": [
{"type": "reflection"},
{"type": "reflection"}
]},
{"name": "Grid Extraction", "physicalSurface": 4, "bTypes": [
{"type": "absorption"},
{"type": "absorption"}
]},
{"name": "Grid Acceleration", "physicalSurface": 5, "bTypes": [
{"type": "absorption"},
{"type": "absorption"}
]},
{"name": "Axis", "physicalSurface": 6, "bTypes": [
{"type": "axis"},
{"type": "axis"}
]}
],
"boundaryEM": [
{"name": "Extraction Grid", "type": "dirichlet", "potential": -150.0, "physicalSurface": 4},
{"name": "Acceleration Grid", "type": "dirichlet", "potential": -600.0, "physicalSurface": 5},
{"name": "Ionization Chamber", "type": "dirichlet", "potential": 0.0, "physicalSurface": 1}
],
"inject": [
{"name": "Cathode Electron", "species": "Electron", "flow": 1.0e-4, "units": "A", "v": 87000.0, "T": [2500.0, 2500.0, 2500.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [-1, 0, 0], "physicalSurface": 2}
],
"reference": {
"density": 1.0e16,
"mass": 9.109e-31,
"temperature": 2500.0,
"radius": 1.88e-10
},
"case": {
"tau": [1.0e-9, 1.0e-11],
"time": 1.0e-6,
"pusher": ["2DCylCharged", "2DCylCharged"],
"WeightingScheme": "Volume",
"EMSolver": "Electrostatic"
},
"parallel": {
"OpenMP":{
"nThreads": 24
}
}
}

View file

@ -8,7 +8,7 @@
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [

View file

@ -8,7 +8,7 @@
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [

View file

@ -0,0 +1,55 @@
{
"output": {
"path": "./runs/Argon_Expansion/",
"triggerOutput": 10,
"cpuTime": false,
"numColl": false,
"folder": "Nocoll_case"
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [
{"name": "Argon", "type": "neutral", "mass": 6.633e-26, "weight": 1.0e8, "ion": "Argon+"},
{"name": "Argon+", "type": "charged", "mass": 6.633e-26, "weight": 1.0e8, "charge": 1.0, "neutral": "Argon"}
],
"boundary": [
{"name": "Injection", "physicalSurface": 1, "bTypes": [
{"type": "transparent"},
{"type": "transparent"}
]},
{"name": "Exterior", "physicalSurface": 2, "bTypes": [
{"type": "transparent"},
{"type": "transparent"}
]},
{"name": "Axis", "physicalSurface": 3, "bTypes": [
{"type": "axis"},
{"type": "axis"}
]}
],
"inject": [
{"name": "Exhausts Ar", "species": "Argon", "flow": 0.7, "units": "sccm", "v": 300.0, "T": [300.0, 300.0, 300.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [1, 0, 0], "physicalSurface": 1},
{"name": "Exhausts Ar+", "species": "Argon+", "flow": 0.3, "units": "sccm", "v": 40000.0, "T": [300.0, 300.0, 300.0],
"velDist": ["Maxwellian", "Maxwellian", "Maxwellian"], "n": [1, 0, 0], "physicalSurface": 1}
],
"reference": {
"density": 1.0e19,
"mass": 6.633e-26,
"temperature": 300.0,
"radius": 1.88e-10
},
"case": {
"tau": [1.0e-6, 1.0e-6],
"time": 4.0e-3,
"pusher": ["2DCylNeutral", "2DCylNeutral"],
"WeightingScheme": "Volume"
},
"parallel": {
"OpenMP":{
"nThreads": 24
}
}
}

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@ -7,7 +7,7 @@
},
"geometry": {
"type": "2DCyl",
"meshType": "gmsh",
"meshType": "gmsh2",
"meshFile": "mesh.msh"
},
"species": [

View file

@ -4,11 +4,12 @@ OBJECTS = $(OBJDIR)/moduleMesh.o $(OBJDIR)/moduleMeshBoundary.o $(OBJDIR)/module
$(OBJDIR)/moduleBoundary.o $(OBJDIR)/moduleCaseParam.o $(OBJDIR)/moduleRefParam.o \
$(OBJDIR)/moduleCollisions.o $(OBJDIR)/moduleTable.o $(OBJDIR)/moduleParallel.o \
$(OBJDIR)/moduleEM.o $(OBJDIR)/moduleRandom.o $(OBJDIR)/moduleMath.o \
$(OBJDIR)/moduleMesh3DCart.o $(OBJDIR)/moduleMesh3DCartRead.o \
$(OBJDIR)/moduleMesh2DCyl.o $(OBJDIR)/moduleMesh2DCylRead.o \
$(OBJDIR)/moduleMesh2DCart.o $(OBJDIR)/moduleMesh2DCartRead.o \
$(OBJDIR)/moduleMesh1DCart.o $(OBJDIR)/moduleMesh1DCartRead.o \
$(OBJDIR)/moduleMesh1DRad.o $(OBJDIR)/moduleMesh1DRadRead.o
$(OBJDIR)/moduleMeshInputGmsh2.o $(OBJDIR)/moduleMeshOutputGmsh2.o \
$(OBJDIR)/moduleMesh3DCart.o \
$(OBJDIR)/moduleMesh2DCyl.o \
$(OBJDIR)/moduleMesh2DCart.o \
$(OBJDIR)/moduleMesh1DRad.o \
$(OBJDIR)/moduleMesh1DCart.o
all: $(OUTPUT)

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@ -1,8 +1,5 @@
all: moduleMesh1DCart.o moduleMesh1DCartRead.o
all: moduleMesh1DCart.o
moduleMesh1DCart.o: moduleMesh1DCart.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
moduleMesh1DCartRead.o: moduleMesh1DCart.o moduleMesh1DCartRead.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@

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@ -308,25 +308,25 @@ MODULE moduleMesh1DCart
END SUBROUTINE partialDerSegm
!Computes local stiffness matrix
FUNCTION elemKSegm(self) RESULT(ke)
PURE FUNCTION elemKSegm(self) RESULT(localK)
IMPLICIT NONE
CLASS(meshVol1DCartSegm), INTENT(in):: self
REAL(8):: ke(1:2,1:2)
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: Xii(1:3)
REAL(8):: dPsi(1:1, 1:2)
REAL(8):: invJ(1), detJ
INTEGER:: l
ke = 0.D0
ALLOCATE(localK(1:2,1:2))
localK = 0.D0
Xii = 0.D0
DO l = 1, 3
xii(1) = corSeg(l)
dPsi = self%dPsi(Xii)
detJ = self%detJac(Xii, dPsi)
invJ = self%invJac(Xii, dPsi)
ke = ke + MATMUL(RESHAPE(MATMUL(invJ,dPsi), (/ 2, 1/)), &
localK = localK + MATMUL(RESHAPE(MATMUL(invJ,dPsi), (/ 2, 1/)), &
RESHAPE(MATMUL(invJ,dPsi), (/ 1, 2/)))* &
wSeg(l)/detJ
@ -522,6 +522,117 @@ MODULE moduleMesh1DCart
END FUNCTION invJ1DCart
SUBROUTINE connectMesh1DCart(self)
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e, et
DO e = 1, self%numVols
!Connect Vol-Vol
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connectVolVol(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connect Vol-Edge
DO et = 1, self%numEdges
CALL connectVolEdge(self%vols(e)%obj, self%edges(et)%obj)
END DO
END DO
END SUBROUTINE connectMesh1DCart
SUBROUTINE connectVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol1DCartSegm)
SELECT TYPE(elemB)
TYPE IS(meshVol1DCartSegm)
CALL connectSegmSegm(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolVol
SUBROUTINE connectSegmSegm(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemA
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectSegmSegm
SUBROUTINE connectVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS (meshVol1DCartSegm)
SELECT TYPE(elemB)
CLASS IS(meshEdge1DCart)
CALL connectSegmEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolEdge
SUBROUTINE connectSegmEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemA
CLASS(meshEdge1DCart), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectSegmEdge
END MODULE moduleMesh1DCart

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@ -1,264 +0,0 @@
MODULE moduleMesh1DCartRead
USE moduleMesh
USE moduleMesh1DCart
!TODO: make this abstract to allow different mesh formats
TYPE, EXTENDS(meshGeneric):: mesh1DCartGeneric
CONTAINS
PROCEDURE, PASS:: init => init1DCartMesh
PROCEDURE, PASS:: readMesh => readMesh1DCart
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
!Init 1D mesh
SUBROUTINE init1DCartMesh(self, meshFormat)
USE moduleMesh
USE moduleErrors
IMPLICIT NONE
CLASS(mesh1DCartGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
SELECT CASE(meshFormat)
CASE ("gmsh")
self%printOutput => printOutputGmsh
self%printColl => printCollGmsh
self%printEM => printEMGmsh
CASE DEFAULT
CALL criticalError("Mesh type " // meshFormat // " not supported.", "init1DCart")
END SELECT
END SUBROUTINE init1DCartMesh
!Reads 1D mesh
SUBROUTINE readMesh1DCart(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh1DCartGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x
INTEGER:: p(1:2)
INTEGER:: e, et, n, eTemp, elemType, bt
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Open file mesh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read nodes coordinates. Only relevant for x
DO e = 1, self%numNodes
READ(10, *) n, x
ALLOCATE(meshNode1DCart:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/ x, 0.D0, 0.D0 /))
END DO
!Skips comments
READ(10, *)
READ(10, *)
!Reads the total number of elements (edges+vol)
READ(10, *) totalNumElem
self%numEdges = 0
DO e = 1, totalNumElem
READ(10, *) eTemp, elemType
IF (elemType == 15) THEN !15 is physical node in GMSH
self%numEdges = e
END IF
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = totalNumelem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beginning of reading elements
DO e = 1, totalNumelem
BACKSPACE(10)
END DO
!Reads edges
DO e = 1, self%numEdges
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1)
!Associate boundary condition
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge1DCart:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:1), bt, boundaryType)
END DO
!Read and initialize volumes
DO e = 1, self%numVols
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:2)
ALLOCATE(meshVol1DCartSegm:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:2))
END DO
CLOSE(10)
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity betwen vols and edges
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh1DCart
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol1DCartSegm)
SELECT TYPE(elemB)
TYPE IS(meshVol1DCartSegm)
CALL connectedSegmSegm(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedSegmSegm(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemA
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmSegm
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS (meshVol1DCartSegm)
SELECT TYPE(elemB)
CLASS IS(meshEdge1DCart)
CALL connectedSegmEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
SUBROUTINE connectedSegmEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DCartSegm), INTENT(inout), TARGET:: elemA
CLASS(meshEdge1DCart), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:,1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8):: localK(1:2,1:2)
INTEGER:: i, j
INTEGER:: n(1:2)
SELECT TYPE(elem)
TYPE IS(meshVol1DCartSegm)
localK = elem%elemK()
n = (/ elem%n1%n, elem%n2%n /)
CLASS DEFAULT
n = 0
localK = 0.D0
END SELECT
DO i = 1, 2
DO j = 1, 2
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh1DCartRead

View file

@ -1,8 +1,5 @@
all: moduleMesh1DRad.o moduleMesh1DRadRead.o
all: moduleMesh1DRad.o
moduleMesh1DRad.o: moduleMesh1DRad.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
moduleMesh1DRadRead.o: moduleMesh1DRad.o moduleMesh1DRadRead.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@

View file

@ -312,19 +312,20 @@ MODULE moduleMesh1DRad
END SUBROUTINE partialDerRad
!Computes local stiffness matrix
PURE FUNCTION elemKRad(self) RESULT(ke)
PURE FUNCTION elemKRad(self) RESULT(localK)
USE moduleConstParam, ONLY: PI2
IMPLICIT NONE
CLASS(meshVol1DRadSegm), INTENT(in):: self
REAL(8):: ke(1:2,1:2)
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: Xii(1:3)
REAL(8):: dPsi(1:1, 1:2)
REAL(8):: invJ(1), detJ
REAL(8):: r, fPsi(1:2)
INTEGER:: l
ke = 0.D0
ALLOCATE(localK(1:2, 1:2))
localK = 0.D0
Xii = 0.D0
DO l = 1, 3
xii(1) = corSeg(l)
@ -333,13 +334,13 @@ MODULE moduleMesh1DRad
invJ = self%invJac(Xii, dPsi)
fPsi = self%fPsi(Xii)
r = DOT_PRODUCT(fPsi, self%r)
ke = ke + MATMUL(RESHAPE(MATMUL(invJ,dPsi), (/ 2, 1/)), &
localK = localK + MATMUL(RESHAPE(MATMUL(invJ,dPsi), (/ 2, 1/)), &
RESHAPE(MATMUL(invJ,dPsi), (/ 1, 2/)))* &
r*wSeg(l)/detJ
END DO
ke = ke*PI2
localK = localK*PI2
END FUNCTION elemKRad
@ -532,5 +533,117 @@ MODULE moduleMesh1DRad
END FUNCTION invJ1DRad
SUBROUTINE connectMesh1DRad(self)
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e, et
DO e = 1, self%numVols
!Connect Vol-Vol
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connectVolVol(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connect Vol-Edge
DO et = 1, self%numEdges
CALL connectVolEdge(self%vols(e)%obj, self%edges(et)%obj)
END DO
END DO
END SUBROUTINE connectMesh1DRad
SUBROUTINE connectVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol1DRadSegm)
SELECT TYPE(elemB)
TYPE IS(meshVol1DRadSegm)
CALL connectSegmSegm(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolVol
SUBROUTINE connectSegmSegm(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemA
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectSegmSegm
SUBROUTINE connectVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS (meshVol1DRadSegm)
SELECT TYPE(elemB)
CLASS IS(meshEdge1DRad)
CALL connectSegmEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolEdge
SUBROUTINE connectSegmEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemA
CLASS(meshEdge1DRad), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectSegmEdge
END MODULE moduleMesh1DRad

View file

@ -1,264 +0,0 @@
MODULE moduleMesh1DRadRead
USE moduleMesh
USE moduleMesh1DRad
!TODO: make this abstract to allow different mesh formats
TYPE, EXTENDS(meshGeneric):: mesh1DRadGeneric
CONTAINS
PROCEDURE, PASS:: init => init1DRadMesh
PROCEDURE, PASS:: readMesh => readMesh1DRad
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
!Init 1D mesh
SUBROUTINE init1DRadMesh(self, meshFormat)
USE moduleMesh
USE moduleErrors
IMPLICIT NONE
CLASS(mesh1DRadGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
SELECT CASE(meshFormat)
CASE ("gmsh")
self%printOutput => printOutputGmsh
self%printColl => printCollGmsh
self%printEM => printEMGmsh
CASE DEFAULT
CALL criticalError("Mesh type " // meshFormat // " not supported.", "init1DRad")
END SELECT
END SUBROUTINE init1DRadMesh
!Reads 1D mesh
SUBROUTINE readMesh1DRad(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh1DRadGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x
INTEGER:: p(1:2)
INTEGER:: e, et, n, eTemp, elemType, bt
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Open file mesh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read nodes coordinates. Only relevant for x
DO e = 1, self%numNodes
READ(10, *) n, x
ALLOCATE(meshNode1DRad:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/ x, 0.D0, 0.D0 /))
END DO
!Skips comments
READ(10, *)
READ(10, *)
!Reads the total number of elements (edges+vol)
READ(10, *) totalNumElem
self%numEdges = 0
DO e = 1, totalNumElem
READ(10, *) eTemp, elemType
IF (elemType == 15) THEN !15 is physical node in GMSH
self%numEdges = e
END IF
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = totalNumelem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beginning of reading elements
DO e = 1, totalNumelem
BACKSPACE(10)
END DO
!Reads edges
DO e = 1, self%numEdges
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1)
!Associate boundary condition
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge1DRad:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:1), bt, boundaryType)
END DO
!Read and initialize volumes
DO e = 1, self%numVols
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:2)
ALLOCATE(meshVol1DRadSegm:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:2))
END DO
CLOSE(10)
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity betwen vols and edges
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh1DRad
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol1DRadSegm)
SELECT TYPE(elemB)
TYPE IS(meshVol1DRadSegm)
CALL connectedSegmSegm(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedSegmSegm(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemA
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmSegm
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS (meshVol1DRadSegm)
SELECT TYPE(elemB)
CLASS IS(meshEdge1DRad)
CALL connectedSegmEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
SUBROUTINE connectedSegmEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DRadSegm), INTENT(inout), TARGET:: elemA
CLASS(meshEdge1DRad), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:,1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8):: localK(1:2,1:2)
INTEGER:: i, j
INTEGER:: n(1:2)
SELECT TYPE(elem)
TYPE IS(meshVol1DRadSegm)
localK = elem%elemK()
n = (/ elem%n1%n, elem%n2%n /)
CLASS DEFAULT
n = 0
localK = 0.D0
END SELECT
DO i = 1, 2
DO j = 1, 2
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh1DRadRead

View file

@ -1,8 +1,5 @@
all : moduleMesh2DCart.o moduleMesh2DCartRead.o
all : moduleMesh2DCart.o
moduleMesh2DCart.o: moduleMesh2DCart.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
moduleMesh2DCartRead.o: moduleMesh2DCart.o moduleMesh2DCartRead.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@

View file

@ -414,17 +414,18 @@ MODULE moduleMesh2DCart
END SUBROUTINE partialDerQuad
!Computes element local stiffness matrix
PURE FUNCTION elemKQuad(self) RESULT(ke)
PURE FUNCTION elemKQuad(self) RESULT(localK)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: xi(1:3)
REAL(8):: fPsi(1:4), dPsi(1:2,1:4)
REAL(8):: ke(1:4,1:4)
REAL(8):: invJ(1:2,1:2), detJ
INTEGER:: l, m
ke=0.D0
ALLOCATE(localK(1:4, 1:4))
localK=0.D0
xi=0.D0
!Start 2D Gauss Quad Integral
DO l=1, 3
@ -436,7 +437,7 @@ MODULE moduleMesh2DCart
fPsi = self%fPsi(xi)
detJ = self%detJac(xi,dPsi)
invJ = self%invJac(xi,dPsi)
ke = ke + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*wQuad(l)*wQuad(m)/detJ
localK = localK + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*wQuad(l)*wQuad(m)/detJ
END DO
END DO
@ -776,17 +777,18 @@ MODULE moduleMesh2DCart
END SUBROUTINE partialDerTria
!Computes element local stiffness matrix
PURE FUNCTION elemKTria(self) RESULT(ke)
PURE FUNCTION elemKTria(self) RESULT(localK)
IMPLICIT NONE
CLASS(meshVol2DCartTria), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: xi(1:3)
REAL(8):: fPsi(1:3), dPsi(1:2,1:3)
REAL(8):: ke(1:3,1:3)
REAL(8):: invJ(1:2,1:2), detJ
INTEGER:: l
ke=0.D0
ALLOCATE(localK(1:4, 1:4))
localK=0.D0
xi=0.D0
!Start 2D Gauss Quad Integral
DO l=1, 4
@ -796,7 +798,7 @@ MODULE moduleMesh2DCart
detJ = self%detJac(xi,dPsi)
invJ = self%invJac(xi,dPsi)
fPsi = self%fPsi(xi)
ke = ke + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*wTria(l)/detJ
localK = localK + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*wTria(l)/detJ
END DO
@ -1017,4 +1019,449 @@ MODULE moduleMesh2DCart
END FUNCTION invJ2DCart
SUBROUTINE connectMesh2DCart(self)
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e, et
DO e = 1, self%numVols
!Connect Vol-Vol
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connectVolVol(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connect Vol-Edge
DO et = 1, self%numEdges
CALL connectVolEdge(self%vols(e)%obj, self%edges(et)%obj)
END DO
END DO
END SUBROUTINE connectMesh2DCart
!Selects type of elements to build connection
SUBROUTINE connectVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol2DCartQuad)
!Element A is a quadrilateral
SELECT TYPE(elemB)
TYPE IS(meshVol2DCartQuad)
!Element B is a quadrilateral
CALL connectQuadQuad(elemA, elemB)
TYPE IS(meshVol2DCartTria)
!Element B is a triangle
CALL connectQuadTria(elemA, elemB)
END SELECT
TYPE IS(meshVol2DCartTria)
!Element A is a Triangle
SELECT TYPE(elemB)
TYPE IS(meshVol2DCartQuad)
!Element B is a quadrilateral
CALL connectQuadTria(elemB, elemA)
TYPE IS(meshVol2DCartTria)
!Element B is a triangle
CALL connectTriaTria(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolVol
SUBROUTINE connectVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge2DCart)
SELECT TYPE(elemA)
TYPE IS(meshVol2DCartQuad)
!Element A is a quadrilateral
CALL connectQuadEdge(elemA, elemB)
TYPE IS(meshVol2DCartTria)
!Element A is a triangle
CALL connectTriaEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolEdge
SUBROUTINE connectQuadQuad(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n1%n == elemB%n4%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n4%n) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3) .AND. &
elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4) .AND. &
elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
END IF
END SUBROUTINE connectQuadQuad
SUBROUTINE connectQuadTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
END IF
END IF
END SUBROUTINE connectQuadTria
SUBROUTINE connectTriaTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
END IF
END IF
END SUBROUTINE connectTriaTria
SUBROUTINE connectQuadEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCart), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectQuadEdge
SUBROUTINE connectTriaEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCart), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectTriaEdge
END MODULE moduleMesh2DCart

View file

@ -1,620 +0,0 @@
MODULE moduleMesh2DCartRead
USE moduleMesh
USE moduleMesh2DCart
TYPE, EXTENDS(meshGeneric):: mesh2DCartGeneric
CONTAINS
PROCEDURE, PASS:: init => init2DCartMesh
PROCEDURE, PASS:: readMesh => readMesh2DCartGmsh
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
!Init mesh
SUBROUTINE init2DCartMesh(self, meshFormat)
USE moduleMesh
USE moduleErrors
IMPLICIT NONE
CLASS(mesh2DCartGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
SELECT CASE(meshFormat)
CASE ("gmsh")
self%printOutput => printOutputGmsh
self%printColl => printCollGmsh
self%printEM => printEMGmsh
CASE DEFAULT
CALL criticalError("Mesh type " // meshFormat // " not supported.", "init2DCartMesh")
END SELECT
END SUBROUTINE init2DCartMesh
!Read mesh from gmsh file
SUBROUTINE readMesh2DCartGmsh(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh2DCartGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x, y
INTEGER:: p(1:4)
INTEGER:: e=0, et=0, n=0, eTemp=0, elemType=0, bt = 0
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Read msh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes,1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes,1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read node cartesian coordinates (x=x, y=y, z=null)
DO e=1, self%numNodes
READ(10, *) n, x, y
ALLOCATE(meshNode2DCart:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x, y, 0.D0 /))
END DO
!Skips comments
READ(10, *)
READ(10, *)
!Reads Totalnumber of elements
READ(10, *) TotalnumElem
!counts edges and volume elements
self%numEdges = 0
DO e=1, TotalnumElem
READ(10,*) eTemp, elemType
IF (elemType==1) THEN
self%numEdges=e
END IF
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = TotalnumElem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beggining to read elements
DO e=1, totalNumElem
BACKSPACE(10)
END DO
!Reads edges
DO e=1, self%numEdges
READ(10,*) n, elemType, eTemp, boundaryType, eTemp, p(1:2)
!Associate boundary condition procedure.
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge2DCart:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:2), bt, boundaryType)
END DO
!Read and initialize volumes
DO e=1, self%numVols
READ(10,*) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE (2)
!Triangular element
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:3)
ALLOCATE(meshVol2DCartTria:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:3))
CASE (3)
!Quadrilateral element
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol2DCartQuad:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
END DO
CLOSE(10)
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity between vols and edges
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh2DCartGmsh
!Selects type of elements to build connection
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol2DCartQuad)
!Element A is a quadrilateral
SELECT TYPE(elemB)
TYPE IS(meshVol2DCartQuad)
!Element B is a quadrilateral
CALL connectedQuadQuad(elemA, elemB)
TYPE IS(meshVol2DCartTria)
!Element B is a triangle
CALL connectedQuadTria(elemA, elemB)
END SELECT
TYPE IS(meshVol2DCartTria)
!Element A is a Triangle
SELECT TYPE(elemB)
TYPE IS(meshVol2DCartQuad)
!Element B is a quadrilateral
CALL connectedQuadTria(elemB, elemA)
TYPE IS(meshVol2DCartTria)
!Element B is a triangle
CALL connectedTriaTria(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge2DCart)
SELECT TYPE(elemA)
TYPE IS(meshVol2DCartQuad)
!Element A is a quadrilateral
CALL connectedQuadEdge(elemA, elemB)
TYPE IS(meshVol2DCartTria)
!Element A is a triangle
CALL connectedTriaEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
SUBROUTINE connectedQuadQuad(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n1%n == elemB%n4%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n4%n) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3) .AND. &
elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4) .AND. &
elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
END IF
END SUBROUTINE connectedQuadQuad
SUBROUTINE connectedQuadTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
END IF
END IF
END SUBROUTINE connectedQuadTria
SUBROUTINE connectedTriaTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
END IF
END IF
END SUBROUTINE connectedTriaTria
SUBROUTINE connectedQuadEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartQuad), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCart), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectedQuadEdge
SUBROUTINE connectedTriaEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCartTria), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCart), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectedTriaEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:,1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8), ALLOCATABLE:: localK(:,:)
INTEGER:: nNodes, i, j
INTEGER, ALLOCATABLE:: n(:)
SELECT TYPE(elem)
TYPE IS(meshVol2DCartQuad)
nNodes = 4
ALLOCATE(localK(1:nNodes,1:nNodes))
localK = elem%elemK()
ALLOCATE(n(1:nNodes))
n = (/ elem%n1%n, elem%n2%n, &
elem%n3%n, elem%n4%n /)
TYPE IS(meshVol2DCartTria)
nNodes = 3
ALLOCATE(localK(1:nNodes,1:nNodes))
localK = elem%elemK()
ALLOCATE(n(1:nNodes))
n = (/ elem%n1%n, elem%n2%n, elem%n3%n /)
CLASS DEFAULT
nNodes = 0
ALLOCATE(localK(1:1, 1:1))
localK = 0.D0
ALLOCATE(n(1:1))
n = 0
END SELECT
DO i = 1, nNodes
DO j = 1, nNodes
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh2DCartRead

View file

@ -1,8 +1,5 @@
all : moduleMesh2DCyl.o moduleMesh2DCylRead.o
all : moduleMesh2DCyl.o
moduleMesh2DCyl.o: moduleMesh2DCyl.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
moduleMesh2DCylRead.o: moduleMesh2DCyl.o moduleMesh2DCylRead.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@

View file

@ -427,18 +427,19 @@ MODULE moduleMesh2DCyl
END FUNCTION randposVolQuad
!Computes element local stiffness matrix
PURE FUNCTION elemKQuad(self) RESULT(ke)
PURE FUNCTION elemKQuad(self) RESULT(localK)
USE moduleConstParam, ONLY: PI2
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: r, xi(1:3)
REAL(8):: fPsi(1:4), dPsi(1:2,1:4)
REAL(8):: ke(1:4,1:4)
REAL(8):: invJ(1:2,1:2), detJ
INTEGER:: l, m
ke=0.D0
ALLOCATE(localK(1:4, 1:4))
localK=0.D0
xi=0.D0
!Start 2D Gauss Quad Integral
DO l=1, 3
@ -451,13 +452,13 @@ MODULE moduleMesh2DCyl
detJ = self%detJac(xi,dPsi)
invJ = self%invJac(xi,dPsi)
r = DOT_PRODUCT(fPsi,self%r)
ke = ke + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)), &
localK = localK + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)), &
MATMUL(invJ,dPsi))* &
r*wQuad(l)*wQuad(m)/detJ
END DO
END DO
ke = ke*PI2
localK = localK*PI2
END FUNCTION elemKQuad
@ -800,18 +801,19 @@ MODULE moduleMesh2DCyl
END SUBROUTINE partialDerTria
!Computes element local stiffness matrix
PURE FUNCTION elemKTria(self) RESULT(ke)
PURE FUNCTION elemKTria(self) RESULT(localK)
USE moduleConstParam, ONLY: PI2
IMPLICIT NONE
CLASS(meshVol2DCylTria), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: r, xi(1:3)
REAL(8):: fPsi(1:3), dPsi(1:2,1:3)
REAL(8):: ke(1:3,1:3)
REAL(8):: invJ(1:2,1:2), detJ
INTEGER:: l
ke=0.D0
ALLOCATE(localK(1:4, 1:4))
localK=0.D0
xi=0.D0
!Start 2D Gauss Quad Integral
DO l=1, 4
@ -822,10 +824,10 @@ MODULE moduleMesh2DCyl
invJ = self%invJac(xi,dPsi)
fPsi = self%fPsi(xi)
r = DOT_PRODUCT(fPsi,self%r)
ke = ke + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*r*wTria(l)/detJ
localK = localK + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*r*wTria(l)/detJ
END DO
ke = ke*PI2
localK = localK*PI2
END FUNCTION elemKTria
@ -1047,4 +1049,449 @@ MODULE moduleMesh2DCyl
END FUNCTION invJ2DCyl
SUBROUTINE connectMesh2DCyl(self)
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e, et
DO e = 1, self%numVols
!Connect Vol-Vol
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connectVolVol(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connect Vol-Edge
DO et = 1, self%numEdges
CALL connectVolEdge(self%vols(e)%obj, self%edges(et)%obj)
END DO
END DO
END SUBROUTINE connectMesh2DCyl
!Selects type of elements to build connection
SUBROUTINE connectVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol2DCylQuad)
!Element A is a quadrilateral
SELECT TYPE(elemB)
TYPE IS(meshVol2DCylQuad)
!Element B is a quadrilateral
CALL connectQuadQuad(elemA, elemB)
TYPE IS(meshVol2DCylTria)
!Element B is a triangle
CALL connectQuadTria(elemA, elemB)
END SELECT
TYPE IS(meshVol2DCylTria)
!Element A is a Triangle
SELECT TYPE(elemB)
TYPE IS(meshVol2DCylQuad)
!Element B is a quadrilateral
CALL connectQuadTria(elemB, elemA)
TYPE IS(meshVol2DCylTria)
!Element B is a triangle
CALL connectTriaTria(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolVol
SUBROUTINE connectVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge2DCyl)
SELECT TYPE(elemA)
TYPE IS(meshVol2DCylQuad)
!Element A is a quadrilateral
CALL connectQuadEdge(elemA, elemB)
TYPE IS(meshVol2DCylTria)
!Element A is a triangle
CALL connectTriaEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolEdge
SUBROUTINE connectQuadQuad(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n1%n == elemB%n4%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n4%n) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3) .AND. &
elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4) .AND. &
elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
END IF
END SUBROUTINE connectQuadQuad
SUBROUTINE connectQuadTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
END IF
END IF
END SUBROUTINE connectQuadTria
SUBROUTINE connectTriaTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
END IF
END IF
END SUBROUTINE connectTriaTria
SUBROUTINE connectQuadEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCyl), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectQuadEdge
SUBROUTINE connectTriaEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCyl), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectTriaEdge
END MODULE moduleMesh2DCyl

View file

@ -1,643 +0,0 @@
MODULE moduleMesh2DCylRead
USE moduleMesh
USE moduleMesh2DCyl
TYPE, EXTENDS(meshGeneric):: mesh2DCylGeneric
CONTAINS
PROCEDURE, PASS:: init => init2DCylMesh
PROCEDURE, PASS:: readMesh => readMesh2DCylGmsh
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
!Init mesh
SUBROUTINE init2DCylMesh(self, meshFormat)
USE moduleMesh
USE moduleErrors
IMPLICIT NONE
CLASS(mesh2DCylGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
SELECT CASE(meshFormat)
CASE ("gmsh")
self%printOutput => printOutputGmsh
self%printColl => printCollGmsh
self%printEM => printEMGmsh
CASE DEFAULT
CALL criticalError("Mesh type " // meshFormat // " not supported.", "init2DCylMesh")
END SELECT
END SUBROUTINE init2DCylMesh
!Read mesh from gmsh file
SUBROUTINE readMesh2DCylGmsh(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh2DCylGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: r, z
INTEGER:: p(1:4)
INTEGER:: e=0, et=0, n=0, eTemp=0, elemType=0, bt = 0
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Read msh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes,1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes,1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read nodes cartesian coordinates (x=z, y=r, z=null)
DO e=1, self%numNodes
READ(10, *) n, z, r
ALLOCATE(meshNode2DCyl:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/z, r, 0.D0 /))
END DO
!Skips comments
READ(10, *)
READ(10, *)
!Reads Totalnumber of elements
READ(10, *) TotalnumElem
!counts edges and volume elements
self%numEdges = 0
DO e=1, TotalnumElem
READ(10,*) eTemp, elemType
IF (elemType==1) THEN
self%numEdges=e
END IF
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = TotalnumElem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beggining to read elements
DO e=1, totalNumElem
BACKSPACE(10)
END DO
!Reads edges
DO e=1, self%numEdges
READ(10,*) n, elemType, eTemp, boundaryType, eTemp, p(1:2)
!Associate boundary condition procedure.
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge2DCyl:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:2), bt, boundaryType)
END DO
!Read and initialize volumes
DO e=1, self%numVols
READ(10,*) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE (2)
!Triangular element
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:3)
ALLOCATE(meshVol2DCylTria:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:3))
CASE (3)
!Quadrilateral element
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol2DCylQuad:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
END DO
CLOSE(10)
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity between vols and edges
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh2DCylGmsh
!Selects type of elements to build connection
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol2DCylQuad)
!Element A is a quadrilateral
SELECT TYPE(elemB)
TYPE IS(meshVol2DCylQuad)
!Element B is a quadrilateral
CALL connectedQuadQuad(elemA, elemB)
TYPE IS(meshVol2DCylTria)
!Element B is a triangle
CALL connectedQuadTria(elemA, elemB)
END SELECT
TYPE IS(meshVol2DCylTria)
!Element A is a Triangle
SELECT TYPE(elemB)
TYPE IS(meshVol2DCylQuad)
!Element B is a quadrilateral
CALL connectedQuadTria(elemB, elemA)
TYPE IS(meshVol2DCylTria)
!Element B is a triangle
CALL connectedTriaTria(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge2DCyl)
SELECT TYPE(elemA)
TYPE IS(meshVol2DCylQuad)
!Element A is a quadrilateral
CALL connectedQuadEdge(elemA, elemB)
TYPE IS(meshVol2DCylTria)
!Element A is a triangle
CALL connectedTriaEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
PURE FUNCTION coincidentNodes(nodesA, nodesB) RESULT(coincident)
IMPLICIT NONE
INTEGER, DIMENSION(1:2), INTENT(in):: nodesA, nodesB
LOGICAL:: coincident
INTEGER:: i
coincident = .FALSE.
DO i = 1, 2
IF (ANY(nodesA(i) == nodesB)) THEN
coincident = .TRUE.
ELSE
coincident = .FALSE.
EXIT
END IF
END DO
END FUNCTION coincidentNodes
SUBROUTINE connectedQuadQuad(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n1%n == elemB%n4%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n4%n) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3) .AND. &
elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4) .AND. &
elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
END IF
END SUBROUTINE connectedQuadQuad
SUBROUTINE connectedQuadTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n4%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
END IF
END IF
END SUBROUTINE connectedQuadTria
SUBROUTINE connectedTriaTria(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemA
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n3%n) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n3%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n3%n) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n3%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n3%n) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n3%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
END IF
END IF
END SUBROUTINE connectedTriaTria
SUBROUTINE connectedQuadEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylQuad), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCyl), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n4%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n4%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (elemA%n4%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n4%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectedQuadEdge
SUBROUTINE connectedTriaEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol2DCylTria), INTENT(inout), TARGET:: elemA
CLASS(meshEdge2DCyl), INTENT(inout), TARGET:: elemB
!Check direction 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (elemA%n1%n == elemB%n1%n .AND. &
elemA%n2%n == elemB%n2%n) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n1%n == elemB%n2%n .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (elemA%n2%n == elemB%n1%n .AND. &
elemA%n3%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n2%n == elemB%n2%n .AND. &
elemA%n3%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
!Check direction 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (elemA%n3%n == elemB%n1%n .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (elemA%n3%n == elemB%n2%n .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = - elemB%normal
END IF
END IF
END SUBROUTINE connectedTriaEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:,1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8), ALLOCATABLE:: localK(:,:)
INTEGER:: nNodes, i, j
INTEGER, ALLOCATABLE:: n(:)
SELECT TYPE(elem)
TYPE IS(meshVol2DCylQuad)
nNodes = 4
ALLOCATE(localK(1:nNodes,1:nNodes))
localK = elem%elemK()
ALLOCATE(n(1:nNodes))
n = (/ elem%n1%n, elem%n2%n, &
elem%n3%n, elem%n4%n /)
TYPE IS(meshVol2DCylTria)
nNodes = 3
ALLOCATE(localK(1:nNodes,1:nNodes))
localK = elem%elemK()
ALLOCATE(n(1:nNodes))
n = (/ elem%n1%n, elem%n2%n, elem%n3%n /)
CLASS DEFAULT
nNodes = 0
ALLOCATE(localK(1:1, 1:1))
localK = 0.D0
ALLOCATE(n(1:1))
n = 0
END SELECT
DO i = 1, nNodes
DO j = 1, nNodes
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh2DCylRead

View file

@ -1,8 +1,5 @@
all : moduleMesh3DCart.o moduleMesh3DCartRead.o
all : moduleMesh3DCart.o
moduleMesh3DCart.o: moduleMesh3DCart.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
moduleMesh3DCartRead.o: moduleMesh3DCart.o moduleMesh3DCartRead.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@

View file

@ -417,23 +417,25 @@ MODULE moduleMesh3DCart
END SUBROUTINE partialDerTetra
PURE FUNCTION elemKTetra(self) RESULT(ke)
PURE FUNCTION elemKTetra(self) RESULT(localK)
IMPLICIT NONE
CLASS(meshVol3DCartTetra), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
REAL(8):: xii(1:3)
REAL(8):: fPsi(1:4), dPsi(1:3, 1:4)
REAL(8):: ke(1:4,1:4)
REAL(8):: invJ(1:3,1:3), detJ
ALLOCATE(localK(1:4,1:4))
localK = 0.D0
xii = 0.D0
!TODO: One point Gauss integral. Upgrade when possible
ke = 0.D0
xii = (/ 0.25D0, 0.25D0, 0.25D0 /)
dPsi = self%dPsi(xii)
detJ = self%detJac(xii, dPsi)
invJ = self%invJac(xii, dPsi)
fPsi = self%fPsi(xii)
ke = ke + MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*1.D0/detJ
localK = MATMUL(TRANSPOSE(MATMUL(invJ,dPsi)),MATMUL(invJ,dPsi))*1.D0/detJ
END FUNCTION elemKTetra
@ -456,7 +458,7 @@ MODULE moduleMesh3DCart
detJ = self%detJac(xii, dPsi)
fPsi = self%fPsi(xii)
f = DOT_PRODUCT(fPsi, source)
localF = localF + f*fPsi*1.D0*detJ
localF = f*fPsi*1.D0*detJ
END FUNCTION elemFTetra
@ -662,5 +664,369 @@ MODULE moduleMesh3DCart
END FUNCTION invJ3DCart
!Selects type of elements to build connection
SUBROUTINE connectVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol3DCartTetra)
!Element A is a tetrahedron
SELECT TYPE(elemB)
TYPE IS(meshVol3DCartTetra)
!Element B is a tetrahedron
CALL connectTetraTetra(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolVol
SUBROUTINE connectVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge3DCartTria)
SELECT TYPE(elemA)
TYPE IS(meshVol3DCartTetra)
!Element A is a tetrahedron
CALL connectTetraEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectVolEdge
SUBROUTINE connectMesh3DCart(self)
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e, et
DO e = 1, self%numVols
!Connect Vol-Vol
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connectVolVol(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connect Vol-Edge
DO et = 1, self%numEdges
CALL connectVolEdge(self%vols(e)%obj, self%edges(et)%obj)
END DO
END DO
END SUBROUTINE connectMesh3DCart
!Checks if two sets of nodes are coincidend in any order
PURE FUNCTION coincidentNodes(nodesA, nodesB) RESULT(coincident)
IMPLICIT NONE
INTEGER, DIMENSION(1:3), INTENT(in):: nodesA, nodesB
LOGICAL:: coincident
INTEGER:: i
coincident = .FALSE.
DO i = 1, 3
IF (ANY(nodesA(i) == nodesB)) THEN
coincident = .TRUE.
ELSE
coincident = .FALSE.
EXIT
END IF
END DO
END FUNCTION coincidentNodes
SUBROUTINE connectTetraTetra(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemA
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemB
!Check surface 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e4 => elemA
END IF
END IF
END SUBROUTINE connectTetraTetra
SUBROUTINE connectTetraEdge(elemA, elemB)
USE moduleMath
IMPLICIT NONE
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemA
CLASS(meshEdge3DCartTria), INTENT(inout), TARGET:: elemB
INTEGER:: nodesEdge(1:3)
REAL(8), DIMENSION(1:3):: vec1, vec2
REAL(8):: normVol(1:3)
nodesEdge = (/ elemB%n1%n, elemB%n2%n, elemB%n3%n /)
!Check surface 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elema%n3%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(2) - elemA%x(1), &
elemA%y(2) - elemA%y(1), &
elemA%z(2) - elemA%z(1) /)
vec2 = (/ elemA%x(3) - elemA%x(1), &
elemA%y(3) - elemA%y(1), &
elemA%z(3) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSE
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(3) - elemA%x(2), &
elemA%y(3) - elemA%y(2), &
elemA%z(3) - elemA%z(2) /)
vec2 = (/ elemA%x(4) - elemA%x(2), &
elemA%y(4) - elemA%y(2), &
elemA%z(4) - elemA%z(2) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSE
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elema%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(2) - elemA%x(1), &
elemA%y(2) - elemA%y(1), &
elemA%z(2) - elemA%z(1) /)
vec2 = (/ elemA%x(4) - elemA%x(1), &
elemA%y(4) - elemA%y(1), &
elemA%z(4) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSE
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elema%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(3) - elemA%x(1), &
elemA%y(3) - elemA%y(1), &
elemA%z(3) - elemA%z(1) /)
vec2 = (/ elemA%x(4) - elemA%x(1), &
elemA%y(4) - elemA%y(1), &
elemA%z(4) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSE
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
END SUBROUTINE connectTetraEdge
END MODULE moduleMesh3DCart

View file

@ -1,544 +0,0 @@
MODULE moduleMesh3DCartRead
USE moduleMesh
USE moduleMesh3DCart
TYPE, EXTENDS(meshGeneric):: mesh3DCartGeneric
CONTAINS
PROCEDURE, PASS:: init => init3DCartMesh
PROCEDURE, PASS:: readMesh => readMesh3DCartGmsh
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
!Init mesh
SUBROUTINE init3DCartMesh(self, meshFormat)
USE moduleMesh
USE moduleErrors
IMPLICIT NONE
CLASS(mesh3DCartGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
SELECT CASE(meshFormat)
CASE ("gmsh")
self%printOutput => printOutputGmsh
self%printColl => printCollGmsh
self%printEM => printEMGmsh
CASE DEFAULT
CALL criticalError("Mesh type " // meshFormat // " not supported.", "init3DCartMesh")
END SELECT
END SUBROUTINE init3DCartMesh
!Read mesh from gmsh file
SUBROUTINE readMesh3DCartGmsh(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh3DCartGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x, y, z
INTEGER:: p(1:4)
INTEGER:: e = 0, et = 0, n = 0, eTemp = 0, elemType = 0, bt = 0
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Read mesh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read node cartesian coordinates (x = x, y = y, z = z)
DO e = 1, self%numNodes
READ(10, *) n, x, y, z
ALLOCATE(meshNode3Dcart::self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x, y, z /))
END DO
!Skip comments
READ(10, *)
READ(10, *)
!Reads total number of elements
READ(10, *) totalNumElem
!conts edges and volume elements
self%numEdges = 0
DO e = 1, totalNumElem
READ(10, *) eTemp, elemType
IF (elemType == 2) THEN
self%numEdges = e
END IF
END DO
!Substract the number of edges to the total number of elements to obtain the number
!of volume elements
self%numVols = totalNumElem - self%numEdges
!Allocate required arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beggining to read each specific element
DO e = 1, totalNumElem
BACKSPACE(10)
END DO
!Reads surfaces
DO e = 1, self%numEdges
READ(10, *) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE(2)
!Triangular surface
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1:3)
bt = getBoundaryID(boundaryType)
ALLOCATE(meshEdge3DCartTria:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:3), bt, boundaryType)
END SELECT
END DO
!Read and initialize volumes
DO e = 1, self%numVols
READ(10, *) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE(4)
!Tetrahedron element
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol3DCartTetra:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
END DO
CLOSE(10)
!Build connectivy between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity between vols and surfaces
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh3DCartGmsh
!Selects type of elements to build connection
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol3DCartTetra)
!Element A is a tetrahedron
SELECT TYPE(elemB)
TYPE IS(meshVol3DCartTetra)
!Element B is a tetrahedron
CALL connectedTetraTetra(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemB)
CLASS IS(meshEdge3DCartTria)
SELECT TYPE(elemA)
TYPE IS(meshVol3DCartTetra)
!Element A is a tetrahedron
CALL connectedTetraEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
PURE FUNCTION coincidentNodes(nodesA, nodesB) RESULT(coincident)
IMPLICIT NONE
INTEGER, DIMENSION(1:3), INTENT(in):: nodesA, nodesB
LOGICAL:: coincident
INTEGER:: i
coincident = .FALSE.
DO i = 1, 3
IF (ANY(nodesA(i) == nodesB)) THEN
coincident = .TRUE.
ELSE
coincident = .FALSE.
EXIT
END IF
END DO
END FUNCTION coincidentNodes
SUBROUTINE connectedTetraTetra(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemA
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemB
!TODO: Try to find a much clear way to do this
!Check surface 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n3%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e1 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e2 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e3 => elemB
elemB%e4 => elemA
END IF
END IF
!Check surface 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n3%n/))) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n2%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e2 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n2%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e3 => elemA
ELSEIF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elemA%n4%n/), &
(/elemB%n1%n, elemB%n3%n, elemB%n4%n/))) THEN
elemA%e4 => elemB
elemB%e4 => elemA
END IF
END IF
END SUBROUTINE connectedTetraTetra
SUBROUTINE connectedTetraEdge(elemA, elemB)
USE moduleMath
IMPLICIT NONE
CLASS(meshVol3DCartTetra), INTENT(inout), TARGET:: elemA
CLASS(meshEdge3DCartTria), INTENT(inout), TARGET:: elemB
INTEGER:: nodesEdge(1:3)
REAL(8), DIMENSION(1:3):: vec1, vec2
REAL(8):: normVol(1:3)
nodesEdge = (/ elemB%n1%n, elemB%n2%n, elemB%n3%n /)
!Check surface 1
IF (.NOT. ASSOCIATED(elemA%e1)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elema%n3%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(2) - elemA%x(1), &
elemA%y(2) - elemA%y(1), &
elemA%z(2) - elemA%z(1) /)
vec2 = (/ elemA%x(3) - elemA%x(1), &
elemA%y(3) - elemA%y(1), &
elemA%z(3) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e1 => elemB
elemB%e1 => elemA
ELSE
elemA%e1 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 2
IF (.NOT. ASSOCIATED(elemA%e2)) THEN
IF (coincidentNodes((/elemA%n2%n, elemA%n3%n, elemA%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(3) - elemA%x(2), &
elemA%y(3) - elemA%y(2), &
elemA%z(3) - elemA%z(2) /)
vec2 = (/ elemA%x(4) - elemA%x(2), &
elemA%y(4) - elemA%y(2), &
elemA%z(4) - elemA%z(2) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e2 => elemB
elemB%e1 => elemA
ELSE
elemA%e2 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 3
IF (.NOT. ASSOCIATED(elemA%e3)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n2%n, elema%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(2) - elemA%x(1), &
elemA%y(2) - elemA%y(1), &
elemA%z(2) - elemA%z(1) /)
vec2 = (/ elemA%x(4) - elemA%x(1), &
elemA%y(4) - elemA%y(1), &
elemA%z(4) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e3 => elemB
elemB%e1 => elemA
ELSE
elemA%e3 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
!Check surface 4
IF (.NOT. ASSOCIATED(elemA%e4)) THEN
IF (coincidentNodes((/elemA%n1%n, elemA%n3%n, elema%n4%n/), &
nodesEdge)) THEN
vec1 = (/ elemA%x(3) - elemA%x(1), &
elemA%y(3) - elemA%y(1), &
elemA%z(3) - elemA%z(1) /)
vec2 = (/ elemA%x(4) - elemA%x(1), &
elemA%y(4) - elemA%y(1), &
elemA%z(4) - elemA%z(1) /)
normVol = crossProduct(vec1, vec2)
normVol = normalize(normVol)
IF (DOT_PRODUCT(elemB%normal, normVol) == -1.D0) THEN
elemA%e4 => elemB
elemB%e1 => elemA
ELSE
elemA%e4 => elemB
elemB%e2 => elemA
!Revers the normal to point inside the domain
elemB%normal = -elemB%normal
END IF
END IF
END IF
END SUBROUTINE connectedTetraEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:, 1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8), ALLOCATABLE:: localK(:,:)
INTEGER:: nNodes, i, j
INTEGER, ALLOCATABLE:: n(:)
SELECT TYPE(elem)
TYPE IS(meshVol3DCartTetra)
nNodes = 4
ALLOCATE(localK(1:nNodes,1:nNodes))
localK = elem%elemK()
ALLOCATE(n(1:nNodes))
n = (/ elem%n1%n, elem%n2%n, &
elem%n3%n, elem%n4%n /)
CLASS DEFAULT
nNodes = 0
ALLOCATE(localK(1:1, 1:1))
localK = 0.D0
ALLOCATE(n(1:1))
n = 0
END SELECT
DO i = 1, nNodes
DO j = 1, nNodes
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh3DCartRead

View file

@ -0,0 +1,7 @@
all: moduleMeshInputGmsh2.o moduleMeshOutputGmsh2.o
moduleMeshInputGmsh2.o: moduleMeshOutputGmsh2.o moduleMeshInputGmsh2.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
%.o: %.f90
$(FC) $(FCFLAGS) -c $< -o $(OBJDIR)/$@

View file

@ -0,0 +1,295 @@
MODULE moduleMeshInputGmsh2
CONTAINS
!Inits a mesh to use Gmsh2 format
SUBROUTINE initGmsh2(self)
USE moduleMesh
USE moduleMeshOutputGmsh2
IMPLICIT NONE
TYPE(meshParticle), INTENT(inout):: self
self%printOutput => printOutputGmsh2
self%printColl => printCollGmsh2
self%printEM => printEMGmsh2
self%readMesh => readGmsh2
END SUBROUTINE initGmsh2
!Reads a Gmsh 2 format
SUBROUTINE readGmsh2(self, filename)
USE moduleMesh3DCart
USE moduleMesh2DCyl
USE moduleMesh2DCart
USE moduleMesh1DRad
USE moduleMesh1DCart
USE moduleBoundary
IMPLICIT NONE
CLASS(meshParticle), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x1, x2, x3 !3 generic coordinates
INTEGER, ALLOCATABLE:: p(:) !Array for nodes
INTEGER:: e = 0, n = 0, eTemp = 0, elemType = 0, bt = 0
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Read mesh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read the nodes information
DO e = 1, self%numNodes
READ(10, *) n, x1, x2, x3
SELECT CASE(self%geometry)
CASE("3DCart")
ALLOCATE(meshNode3Dcart::self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x1, x2, x3 /))
CASE("2DCyl")
ALLOCATE(meshNode2DCyl:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x1, x2, 0.D0 /))
CASE("2DCart")
ALLOCATE(meshNode2DCart:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x1, x2, 0.D0 /))
CASE("1DRad")
ALLOCATE(meshNode1DRad:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x1, 0.D0, 0.D0 /))
CASE("1DCart")
ALLOCATE(meshNode1DCart:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/x1, 0.D0, 0.D0 /))
END SELECT
END DO
!Skip comments
READ(10, *)
READ(10, *)
!Reads total number of elements (no nodes)
READ(10, *) totalNumElem
!conts edges and volume elements
self%numEdges = 0
DO e = 1, totalNumElem
READ(10, *) eTemp, elemType
SELECT CASE(self%geometry)
CASE("3DCart")
!Element type 2 is triangle in gmsh
IF (elemType == 2) self%numEdges = e
CASE("2DCyl","2DCart")
!Element type 1 is segment in Gmsh
IF (elemType == 1) self%numEdges = e
CASE("1DRad","1DCart")
!Element type 15 is physical point in Gmsh
IF (elemType == 15) self%numEdges = e
END SELECT
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = TotalnumElem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beggining to read elements
DO e=1, totalNumElem
BACKSPACE(10)
END DO
!Reads edges
DO e=1, self%numEdges
!Reads the edge according to the geometry
SELECT CASE(self%geometry)
CASE("3DCart")
READ(10, *) n, elemType, eTemp, boundaryType
BACKSPACE(10)
!Associate boundary condition procedure.
bt = getBoundaryID(boundaryType)
SELECT CASE(elemType)
CASE(2)
!Triangular surface
ALLOCATE(p(1:3))
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1:3)
ALLOCATE(meshEdge3DCartTria:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:3), bt, boundaryType)
DEALLOCATE(p)
END SELECT
CASE("2DCyl")
ALLOCATE(p(1:2))
READ(10,*) n, elemType, eTemp, boundaryType, eTemp, p(1:2)
!Associate boundary condition procedure.
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge2DCyl:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:2), bt, boundaryType)
DEALLOCATE(p)
CASE("2DCart")
ALLOCATE(p(1:2))
READ(10,*) n, elemType, eTemp, boundaryType, eTemp, p(1:2)
!Associate boundary condition procedure.
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge2DCart:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:2), bt, boundaryType)
DEALLOCATE(p)
CASE("1DRad")
ALLOCATE(p(1:1))
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1)
!Associate boundary condition
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge1DRad:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:1), bt, boundaryType)
DEALLOCATE(p)
CASE("1DCart")
ALLOCATE(p(1:1))
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1)
!Associate boundary condition
bt = getBoundaryId(boundaryType)
ALLOCATE(meshEdge1DCart:: self%edges(e)%obj)
CALL self%edges(e)%obj%init(n, p(1:1), bt, boundaryType)
DEALLOCATE(p)
END SELECT
END DO
!Read and initialize volumes
DO e = 1, self%numVols
!Reads the volume according to the geometry
SELECT CASE(self%geometry)
CASE("3DCart")
READ(10, *) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE(4)
!Tetrahedron element
ALLOCATE(p(1:4))
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol3DCartTetra:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
DEALLOCATE(p)
CASE("2DCyl")
READ(10,*) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE (2)
!Triangular element
ALLOCATE(p(1:3))
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:3)
ALLOCATE(meshVol2DCylTria:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:3))
CASE (3)
!Quadrilateral element
ALLOCATE(p(1:4))
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol2DCylQuad:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
DEALLOCATE(p)
CASE("2DCart")
READ(10,*) n, elemType
BACKSPACE(10)
SELECT CASE(elemType)
CASE (2)
!Triangular element
ALLOCATE(p(1:3))
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:3)
ALLOCATE(meshVol2DCartTria:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:3))
CASE (3)
!Quadrilateral element
ALLOCATE(p(1:4))
READ(10,*) n, elemType, eTemp, eTemp, eTemp, p(1:4)
ALLOCATE(meshVol2DCartQuad:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:4))
END SELECT
DEALLOCATE(p)
CASE("1DRad")
ALLOCATE(p(1:2))
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:2)
ALLOCATE(meshVol1DRadSegm:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:2))
DEALLOCATE(p)
CASE("1DCart")
ALLOCATE(p(1:2))
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:2)
ALLOCATE(meshVol1DCartSegm:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:2))
DEALLOCATE(p)
END SELECT
END DO
END SUBROUTINE readGmsh2
END MODULE moduleMeshInputGmsh2

View file

@ -0,0 +1,197 @@
MODULE moduleMeshOutputGmsh2
CONTAINS
!Prints the scattered properties of particles into the nodes
SUBROUTINE printOutputGmsh2(self, t)
USE moduleMesh
USE moduleRefParam
USE moduleSpecies
USE moduleOutput
IMPLICIT NONE
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, i
TYPE(outputFormat):: output(1:self%numNodes)
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
time = DBLE(t)*tauMin*ti_ref
DO i = 1, nSpecies
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_' // species(i)%obj%name // '.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Density ' // species(i)%obj%name // ' (m^-3)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
CALL calculateOutput(self%nodes(n)%obj%output(i), output(n), self%nodes(n)%obj%v, species(i)%obj)
WRITE(60, "(I6,ES20.6E3)") n, output(n)%density
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Velocity ' // species(i)%obj%name // ' (m/s)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 3
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%velocity
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Pressure ' // species(i)%obj%name // ' (Pa)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%pressure
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Temperature ' // species(i)%obj%name // ' (K)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%temperature
END DO
WRITE(60, "(A)") '$EndNodeData'
CLOSE (60)
END DO
END SUBROUTINE printOutputGmsh2
!Prints the number of collisions into the volumes
SUBROUTINE printCollGmsh2(self, t)
USE moduleMesh
USE moduleRefParam
USE moduleCaseParam
USE moduleCollisions
USE moduleOutput
IMPLICIT NONE
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
IF (collOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_Collisions.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$ElementData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Collisions"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numVols
DO n=1, self%numVols
WRITE(60, "(I6,I10)") n + self%numEdges, self%vols(n)%obj%nColl
END DO
WRITE(60, "(A)") '$EndElementData'
CLOSE(60)
END IF
END SUBROUTINE printCollGmsh2
!Prints the electrostatic EM properties into the nodes and volumes
SUBROUTINE printEMGmsh2(self, t)
USE moduleMesh
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, e
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
REAL(8):: xi(1:3)
xi = (/ 0.D0, 0.D0, 0.D0 /)
IF (emOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_EMField.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (20, file = path // folder // '/' // fileName)
WRITE(20, "(A)") '$MeshFormat'
WRITE(20, "(A)") '2.2 0 8'
WRITE(20, "(A)") '$EndMeshFormat'
WRITE(20, "(A)") '$NodeData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Potential (V)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 1
WRITE(20, *) self%numNodes
DO n=1, self%numNodes
WRITE(20, *) n, self%nodes(n)%obj%emData%phi*Volt_ref
END DO
WRITE(20, "(A)") '$EndNodeData'
WRITE(20, "(A)") '$ElementData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Electric Field (V/m)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 3
WRITE(20, *) self%numVols
DO e=1, self%numVols
WRITE(20, *) e+self%numEdges, self%vols(e)%obj%gatherEF(xi)*EF_ref
END DO
WRITE(20, "(A)") '$EndElementData'
CLOSE(20)
END IF
END SUBROUTINE printEMGmsh2
END MODULE moduleMeshOutputGmsh2

View file

@ -0,0 +1,4 @@
all: gmsh2.o
gmsh2.o:
$(MAKE) -C gmsh2 all

View file

@ -1,18 +1,18 @@
all: moduleMesh.o moduleMeshBoundary.o 3DCart.o 2DCyl.o 2DCart.o 1DRad.o 1DCart.o
all: moduleMesh.o moduleMeshBoundary.o inout.o 3DCart.o 2DCyl.o 2DCart.o 1DRad.o 1DCart.o
3DCart.o:
3DCart.o: moduleMesh.o
$(MAKE) -C 3DCart all
2DCyl.o:
2DCyl.o: moduleMesh.o
$(MAKE) -C 2DCyl all
2DCart.o:
2DCart.o: moduleMesh.o
$(MAKE) -C 2DCart all
1DCart.o:
1DCart.o: moduleMesh.o
$(MAKE) -C 1DCart all
1DRad.o:
1DRad.o: moduleMesh.o
$(MAKE) -C 1DRad all
moduleMesh.o: moduleMesh.f90
@ -20,3 +20,6 @@ moduleMesh.o: moduleMesh.f90
moduleMeshBoundary.o: moduleMesh.o moduleMeshBoundary.f90
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
inout.o: 3DCart.o 2DCyl.o 2DCart.o 1DRad.o 1DCart.o
$(MAKE) -C inout all

View file

@ -163,6 +163,7 @@ MODULE moduleMesh
PROCEDURE(randPosVol_interface), DEFERRED, PASS:: randPos
PROCEDURE(scatter_interface), DEFERRED, PASS:: scatter
PROCEDURE(gatherEF_interface), DEFERRED, PASS:: gatherEF
PROCEDURE(elemK_interface), DEFERRED, PASS:: elemK
PROCEDURE(elemF_interface), DEFERRED, PASS:: elemF
PROCEDURE, PASS:: findCell
PROCEDURE(phy2log_interface), DEFERRED, PASS:: phy2log
@ -206,6 +207,13 @@ MODULE moduleMesh
END FUNCTION getNodesVol_interface
PURE FUNCTION elemK_interface(self) RESULT(localK)
IMPORT:: meshVol
CLASS(meshVol), INTENT(in):: self
REAL(8), ALLOCATABLE:: localK(:,:)
END FUNCTION elemK_interface
PURE FUNCTION elemF_interface(self, source) RESULT(localF)
IMPORT:: meshVol
CLASS(meshVol), INTENT(in):: self
@ -252,8 +260,8 @@ MODULE moduleMesh
END TYPE meshVolCont
!Abstract type of mesh
TYPE, PUBLIC, ABSTRACT:: meshGeneric
!Particle mesh
TYPE, PUBLIC:: meshParticle
INTEGER:: numEdges, numNodes, numVols
!Array of nodes
TYPE(meshNodeCont), ALLOCATABLE:: nodes(:)
@ -261,6 +269,8 @@ MODULE moduleMesh
TYPE(meshEdgeCont), ALLOCATABLE:: edges(:)
!Array of volume elements
TYPE(meshVolCont), ALLOCATABLE:: vols(:)
!Geometry of the mesh
CHARACTER(:), ALLOCATABLE:: geometry
!Global stiffness matrix
REAL(8), ALLOCATABLE, DIMENSION(:,:):: K
!Permutation matrix for P L U factorization
@ -268,62 +278,62 @@ MODULE moduleMesh
PROCEDURE(printOutput_interface), POINTER, PASS:: printOutput => NULL()
PROCEDURE(printColl_interface), POINTER, PASS:: printColl => NULL()
PROCEDURE(printEM_interface), POINTER, PASS:: printEM => NULL()
PROCEDURE(readMesh_interface), POINTER, PASS:: readMesh => NULL()
PROCEDURE(connectMesh_interface), POINTER, PASS:: connectMesh => NULL()
CONTAINS
PROCEDURE(initMesh_interface), DEFERRED, PASS:: init
PROCEDURE(readMesh_interface), DEFERRED, PASS:: readMesh
PROCEDURE, PASS:: constructGlobalK
END TYPE meshGeneric
END TYPE meshParticle
ABSTRACT INTERFACE
!Inits the mesh
SUBROUTINE initMesh_interface(self, meshFormat)
IMPORT meshGeneric
CLASS(meshGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: meshFormat
END SUBROUTINE initMesh_interface
!Reads the mesh from a file
SUBROUTINE readMesh_interface(self, filename)
IMPORT meshGeneric
CLASS(meshGeneric), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
END SUBROUTINE readMesh_interface
!Prints Species data
SUBROUTINE printOutput_interface(self, t)
IMPORT meshGeneric
IMPORT meshParticle
CLASS(meshGeneric), INTENT(in):: self
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
END SUBROUTINE printOutput_interface
!Prints number of collisions
SUBROUTINE printColl_interface(self, t)
IMPORT meshGeneric
IMPORT meshParticle
CLASS(meshGeneric), INTENT(in):: self
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
END SUBROUTINE printColl_interface
!Prints EM info
SUBROUTINE printEM_interface(self, t)
IMPORT meshGeneric
IMPORT meshParticle
CLASS(meshGeneric), INTENT(in):: self
CLASS(meshParticle), INTENT(in):: self
INTEGER, INTENT(in):: t
END SUBROUTINE printEM_interface
!Reads the mesh from a file
SUBROUTINE readMesh_interface(self, filename)
IMPORT meshParticle
CLASS(meshParticle), INTENT(inout):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
END SUBROUTINE readMesh_interface
SUBROUTINE connectMesh_interface(self)
IMPORT meshParticle
CLASS(meshParticle), INTENT(inout):: self
END SUBROUTINE connectMesh_interface
END INTERFACE
!Generic mesh
CLASS(meshGeneric), ALLOCATABLE, TARGET:: mesh
!Particle mesh
TYPE(meshParticle), TARGET:: mesh
CONTAINS
!Reset the output of node
@ -467,191 +477,31 @@ MODULE moduleMesh
END SUBROUTINE collision
SUBROUTINE printOutputGmsh(self, t)
USE moduleRefParam
USE moduleSpecies
USE moduleOutput
!Constructs the global K matrix
SUBROUTINE constructGlobalK(self)
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, i
TYPE(outputFormat):: output(1:self%numNodes)
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
CLASS(meshParticle), INTENT(inout):: self
INTEGER:: e
INTEGER, ALLOCATABLE:: n(:)
REAL(8), ALLOCATABLE:: localK(:,:)
INTEGER:: nNodes, i, j
time = DBLE(t)*tauMin*ti_ref
DO i = 1, nSpecies
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_' // species(i)%obj%name // '.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Density ' // species(i)%obj%name // ' (m^-3)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
CALL calculateOutput(self%nodes(n)%obj%output(i), output(n), self%nodes(n)%obj%v, species(i)%obj)
WRITE(60, "(I6,ES20.6E3)") n, output(n)%density
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Velocity ' // species(i)%obj%name // ' (m/s)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 3
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%velocity
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Pressure ' // species(i)%obj%name // ' (Pa)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%pressure
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Temperature ' // species(i)%obj%name // ' (K)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%temperature
END DO
WRITE(60, "(A)") '$EndNodeData'
CLOSE (60)
END DO
END SUBROUTINE printOutputGmsh
SUBROUTINE printCollGmsh(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleCollisions
USE moduleOutput
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
IF (collOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_Collisions.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$ElementData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Collisions"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numVols
DO n=1, self%numVols
WRITE(60, "(I6,I10)") n + self%numEdges, self%vols(n)%obj%nColl
END DO
WRITE(60, "(A)") '$EndElementData'
CLOSE(60)
END IF
END SUBROUTINE printCollGmsh
SUBROUTINE printEMGmsh(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, e
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=iterationDigits):: tstring
REAL(8):: xi(1:3)
xi = (/ 0.D0, 0.D0, 0.D0 /)
IF (emOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, iterationFormat) t
fileName='OUTPUT_' // tstring// '_EMField.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (20, file = path // folder // '/' // fileName)
WRITE(20, "(A)") '$MeshFormat'
WRITE(20, "(A)") '2.2 0 8'
WRITE(20, "(A)") '$EndMeshFormat'
WRITE(20, "(A)") '$NodeData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Potential (V)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 1
WRITE(20, *) self%numNodes
DO n=1, self%numNodes
WRITE(20, *) n, self%nodes(n)%obj%emData%phi*Volt_ref
END DO
WRITE(20, "(A)") '$EndNodeData'
WRITE(20, "(A)") '$ElementData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Electric Field (V/m)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 3
WRITE(20, *) self%numVols
DO e = 1, self%numVols
WRITE(20, *) e+self%numEdges, self%vols(e)%obj%gatherEF(xi)*EF_ref
n = self%vols(e)%obj%getNodes()
localK = self%vols(e)%obj%elemK()
nNodes = SIZE(n)
DO i = 1, nNodes
DO j = 1, nNodes
self%K(n(i), n(j)) = self%K(n(i), n(j)) + localK(i, j)
END DO
WRITE(20, "(A)") '$EndElementData'
CLOSE(20)
END IF
END DO
END SUBROUTINE printEMGmsh
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh

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@ -689,11 +689,12 @@ MODULE moduleInput
!Read the geometry (mesh) for the case
SUBROUTINE readGeometry(config)
USE moduleMesh
USE moduleMesh3DCartRead, ONLY: mesh3DCartGeneric
USE moduleMesh2DCylRead, ONLY: mesh2DCylGeneric
USE moduleMesh2DCartRead, ONLY: mesh2DCartGeneric
USE moduleMesh1DCartRead, ONLY: mesh1DCartGeneric
USE moduleMesh1DRadRead, ONLY: mesh1DRadGeneric
USE moduleMeshInputGmsh2, ONLY: initGmsh2
USE moduleMesh3DCart, ONLY: connectMesh3DCart
USE moduleMesh2DCyl, ONLY: connectMesh2DCyl
USE moduleMesh2DCart, ONLY: connectMesh2DCart
USE moduleMesh1DRad, ONLY: connectMesh1DRad
USE moduleMesh1DCart, ONLY: connectMesh1DCart
USE moduleErrors
USE moduleOutput
USE json_module
@ -701,45 +702,51 @@ MODULE moduleInput
TYPE(json_file), INTENT(inout):: config
LOGICAL:: found
CHARACTER(:), ALLOCATABLE:: geometryType, meshFormat, meshFile
CHARACTER(:), ALLOCATABLE:: meshFormat, meshFile
CHARACTER(:), ALLOCATABLE:: fullPath
!Selects the type of geometry.
CALL config%get('geometry.type', geometryType, found)
SELECT CASE(geometryType)
CASE ("3DCart")
!Creates a 3D cylindrical mesh
ALLOCATE(mesh3DCartGeneric:: mesh)
CASE ("2DCyl")
!Creates a 2D cylindrical mesh
ALLOCATE(mesh2DCylGeneric:: mesh)
CASE ("2DCart")
!Creates a 2D cylindrical mesh
ALLOCATE(mesh2DCartGeneric:: mesh)
CASE ("1DCart")
!Creates a 1D cartesian mesh
ALLOCATE(mesh1DCartGeneric:: mesh)
CASE ("1DRad")
!Creates a 1D cartesian mesh
ALLOCATE(mesh1DRadGeneric:: mesh)
CASE DEFAULT
CALL criticalError("Geometry type " // geometryType // " not supported.", "readGeometry")
END SELECT
CALL config%get('geometry.type', mesh%geometry, found)
!Gets the type of mesh
CALL config%get('geometry.meshType', meshFormat, found)
CALL mesh%init(meshFormat)
!Reads the mesh
SELECT CASE(meshFormat)
CASE ("gmsh2")
CALL initGmsh2(mesh)
CASE DEFAULT
CALL criticalError("Mesh format " // meshFormat // " not recogniced", "readGeometry")
END SELECT
!Reads the mesh file
CALL config%get('geometry.meshFile', meshFile, found)
fullpath = path // meshFile
CALL mesh%readMesh(fullPath)
!Creates the connectivity between elements
SELECT CASE(mesh%geometry)
CASE("3DCart")
mesh%connectMesh => connectMesh3DCart
CASE("2DCyl")
mesh%connectMesh => connectMesh2DCyl
CASE("2DCart")
mesh%connectMesh => connectMesh2DCart
CASE("1DRad")
mesh%connectMesh => connectMesh1DRad
CASE("1DCart")
mesh%connectMesh => connectMesh1DCart
END SELECT
CALL mesh%connectMesh
!Builds the K matrix
CALL mesh%constructGlobalK()
END SUBROUTINE readGeometry
SUBROUTINE readEMBoundary(config)