!Implementation for 1D solver for charged particles. Added a 1D case for

testing. Still, no formal test has been performed so issues may appear.
This commit is contained in:
Jorge Gonzalez 2020-12-07 09:12:30 +01:00
commit d69b59143d
14 changed files with 3229 additions and 403 deletions

View file

@ -4,7 +4,8 @@ OBJECTS = $(OBJDIR)/moduleMesh.o $(OBJDIR)/moduleCompTime.o $(OBJDIR)/moduleSolv
$(OBJDIR)/moduleMeshCyl.o $(OBJDIR)/moduleMeshCylRead.o $(OBJDIR)/moduleMeshCylBoundary.o \
$(OBJDIR)/moduleBoundary.o $(OBJDIR)/moduleCaseParam.o $(OBJDIR)/moduleRefParam.o \
$(OBJDIR)/moduleCollisions.o $(OBJDIR)/moduleTable.o $(OBJDIR)/moduleParallel.o \
$(OBJDIR)/moduleEM.o
$(OBJDIR)/moduleEM.o $(OBJDIR)/moduleMesh1D.o $(OBJDIR)/moduleMesh1DRead.o \
$(OBJDIR)/moduleMesh1DBoundary.o
all: $(OUTPUT)

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@ -3,14 +3,15 @@ OBJS = moduleCaseParam.o moduleCompTime.o moduleList.o\
moduleMesh.o moduleMeshCyl.o moduleMeshCylBoundary.o\
moduleMeshCylRead.o moduleOutput.o moduleInput.o \
moduleSolver.o moduleCollisions.o moduleTable.o \
moduleParallel.o moduleEM.o
moduleParallel.o moduleEM.o moduleMesh1D.o \
moduleMesh1DBoundary.o moduleMesh1DRead.o
all: $(OBJS)
moduleCollisions.o: moduleTable.o moduleSpecies.o moduleRefParam.o moduleConstParam.o moduleMeshCyl.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleInput.o: moduleParallel.o moduleRefParam.o moduleCaseParam.o moduleSolver.o moduleInject.o moduleBoundary.o moduleMesh.o moduleMeshCylRead.o moduleErrors.o moduleSpecies.o moduleInput.f95
moduleInput.o: moduleParallel.o moduleRefParam.o moduleCaseParam.o moduleSolver.o moduleInject.o moduleBoundary.o moduleMesh.o moduleMeshCylRead.o moduleMesh1DRead.o moduleErrors.o moduleSpecies.o moduleInput.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleInject.o: moduleSpecies.o moduleSolver.o moduleMesh.o moduleMeshCyl.o moduleInject.f95
@ -19,7 +20,7 @@ moduleInject.o: moduleSpecies.o moduleSolver.o moduleMesh.o moduleMeshCyl.o modu
moduleList.o: moduleSpecies.o moduleErrors.o moduleList.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleMesh.o: moduleOutput.o moduleList.o moduleSpecies.o moduleMesh.f95
moduleMesh.o: moduleCollisions.o moduleOutput.o moduleList.o moduleSpecies.o moduleMesh.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleMeshCyl.o: moduleRefParam.o moduleCollisions.o moduleOutput.o moduleMesh.o moduleMeshCyl.f95
@ -31,6 +32,15 @@ moduleMeshCylBoundary.o: moduleMeshCyl.o moduleMeshCylBoundary.f95
moduleMeshCylRead.o: moduleBoundary.o moduleMeshCyl.o moduleMeshCylBoundary.o moduleMeshCylRead.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleMesh1D.o: moduleRefParam.o moduleCollisions.o moduleOutput.o moduleMesh.o moduleMesh1D.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleMesh1DBoundary.o: moduleMesh1D.o moduleMesh1DBoundary.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleMesh1DRead.o: moduleBoundary.o moduleMesh1D.o moduleMesh1DBoundary.o moduleMesh1DRead.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@
moduleOutput.o: moduleSpecies.o moduleRefParam.o moduleOutput.f95
$(FC) $(FCFLAGS) -c $(subst .o,.f95,$@) -o $(OBJDIR)/$@

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@ -93,22 +93,17 @@ MODULE moduleEM
END DO
!If there is charge in the nodes, compute the local F vector
IF (ANY(rho > 0.D0)) THEN
!Calculates local F vector
localF = mesh%vols(e)%obj%elemF(rho)
!Calculates local F vector
localF = mesh%vols(e)%obj%elemF(rho)
!Assign local F to global F
DO i = 1, nNodes
ni = nodes(i)
vectorF(ni) = vectorF(ni) + localF(i)
!Assign local F to global F
DO i = 1, nNodes
ni = nodes(i)
vectorF(ni) = vectorF(ni) + localF(i)
END DO
DEALLOCATE(localF)
END IF
END DO
DEALLOCATE(localF)
DEALLOCATE(nodes, rho)
END DO

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@ -28,7 +28,6 @@ MODULE moduleInject
!Initialize an injection of particles
SUBROUTINE initInject(self, i, v, n, T, flow, units, sp, physicalSurface)
USE moduleMesh
USE moduleMeshCyl
USE moduleRefParam
USE moduleConstParam
USE moduleSpecies
@ -67,7 +66,7 @@ MODULE moduleInject
self%nParticles = self%nParticles * solver%pusher(sp)%every
self%sp = sp
self%v = self%v * self%n
self%v = self%vMod * self%n
self%vTh = DSQRT(self%T/species(self%sp)%obj%m)
!Gets the edge elements from which particles are injected
@ -85,11 +84,6 @@ MODULE moduleInject
IF (mesh%edges(e)%obj%physicalSurface == physicalSurface) THEN
et = et + 1
self%edges(et) = mesh%edges(e)%obj%n
! SELECT TYPE(edge => mesh%edges(e)%obj)
! CLASS IS (meshEdgeCyl)
! self%weight(et) = (edge%r(1)+edge%r(2))/2.D0
!
! END SELECT
END IF
@ -143,7 +137,6 @@ MODULE moduleInject
USE moduleSpecies
USE moduleSolver
USE moduleMesh
USE moduleMeshCyl
IMPLICIT NONE
CLASS(injectGeneric), INTENT(in):: self
@ -178,13 +171,6 @@ MODULE moduleInject
!$OMP DO
DO n = nMin, nMax
!Select edge randomly from which inject particle
! randomX = RAND()*self%sumWeight
! DO j = 1, self%nEdges
! IF (randomX < self%weight(j)) EXIT
! randomX = randomX - self%weight(j)
!
! END DO
randomX = INT(DBLE(self%nEdges-1)*RAND()) + 1
randomEdge => mesh%edges(self%edges(randomX))%obj
@ -203,11 +189,8 @@ MODULE moduleInject
vBC(self%v(2), self%vTh(2)), &
vBC(self%v(3), self%vTh(3)) /)
IF (solver%pusher(self%sp)%pushSpecies) THEN
!Push new particle
CALL solver%pusher(self%sp)%pushParticle(partInj(n))
END IF
!Push new particle
CALL solver%pusher(self%sp)%pushParticle(partInj(n))
!Assign cell to new particle
CALL solver%updateParticleCell(partInj(n))

View file

@ -45,9 +45,6 @@ MODULE moduleInput
CALL verboseError('Reading Case Parameters...')
CALL readCase(config)
!Read boundary for EM field
CALL readEMBoundary(config)
!Read injection of particles
CALL verboseError('Reading Interactions between species...')
CALL readInject(config)
@ -164,6 +161,11 @@ MODULE moduleInput
!Gets the solver for the electromagnetic field
CALL config%get(object // '.EMSolver', EMType, found)
CALL solver%initEM(EMType)
SELECT CASE(EMType)
CASE("Electrostatic")
CALL readEMBoundary(config)
END SELECT
!Gest the non-analogue scheme
CALL config%get(object // '.NAScheme', NAType, found)
@ -351,7 +353,8 @@ MODULE moduleInput
!Read the geometry (mesh) for the case
SUBROUTINE readGeometry(config)
USE moduleMesh
USE moduleMeshCylRead
USE moduleMeshCylRead, ONLY: meshCylGeneric
USE moduleMesh1DRead, ONLY: mesh1DGeneric
USE moduleErrors
USE moduleOutput
USE json_module
@ -369,26 +372,31 @@ MODULE moduleInput
!Creates a 2D cylindrical mesh
ALLOCATE(meshCylGeneric:: mesh)
!Gets the type of mesh
CALL config%get('geometry.meshType', meshType, found)
SELECT CASE(meshType)
CASE ("gmsh")
!Gets the gmsh file
CALL config%get('geometry.meshFile', meshFile, found)
CASE DEFAULT
CALL criticalError("Mesh type " // meshType // " not supported.", "readGeometry")
END SELECT
!Reads the mesh
fullpath = path // meshFile
CALL mesh%readMesh(fullPath)
CASE ("1DCart")
!Creates a 1D cartesian mesh
ALLOCATE(mesh1DGeneric:: mesh)
CASE DEFAULT
CALL criticalError("Geometry type " // geometryType // " not supported.", "readGeometry")
END SELECT
!Gets the type of mesh
CALL config%get('geometry.meshType', meshType, found)
SELECT CASE(meshType)
CASE ("gmsh")
!Gets the gmsh file
CALL config%get('geometry.meshFile', meshFile, found)
CASE DEFAULT
CALL criticalError("Mesh type " // meshType // " not supported.", "readGeometry")
END SELECT
!Reads the mesh
fullpath = path // meshFile
CALL mesh%readMesh(fullPath)
END SUBROUTINE readGeometry
SUBROUTINE readEMBoundary(config)

View file

@ -130,11 +130,11 @@ MODULE moduleMesh
PROCEDURE(gatherEF_interface), DEFERRED, PASS:: gatherEF
PROCEDURE(getNodesVol_interface), DEFERRED, PASS:: getNodes
PROCEDURE(elemF_interface), DEFERRED, PASS:: elemF
PROCEDURE(findCell_interface), DEFERRED, PASS:: findCell
PROCEDURE, PASS:: findCell
PROCEDURE(phy2log_interface), DEFERRED, PASS:: phy2log
PROCEDURE(inside_interface), DEFERRED, NOPASS:: inside
PROCEDURE(nextElement_interface), DEFERRED, PASS:: nextElement
PROCEDURE(collision_interface), DEFERRED, PASS:: collision
PROCEDURE, PASS:: collision
PROCEDURE(resetOutput_interface), DEFERRED, PASS:: resetOutput
END TYPE meshVol
@ -189,16 +189,6 @@ MODULE moduleMesh
END SUBROUTINE nextElement_interface
SUBROUTINE findCell_interface(self, part, oldCell)
USE moduleSpecies
IMPORT:: meshVol
CLASS(meshVol), INTENT(inout):: self
CLASS(meshVol), OPTIONAL, INTENT(in):: oldCell
CLASS(particle), INTENT(inout), TARGET:: part
END SUBROUTINE findCell_interface
PURE FUNCTION phy2log_interface(self,r) RESULT(xN)
IMPORT:: meshVol
CLASS(meshVol), INTENT(in):: self
@ -249,10 +239,10 @@ MODULE moduleMesh
INTEGER, ALLOCATABLE, DIMENSION(:,:):: IPIV
CONTAINS
PROCEDURE(readMesh_interface), PASS, DEFERRED:: readMesh
PROCEDURE(printOutput_interface), PASS, DEFERRED:: printOutput
PROCEDURE(printColl_interface), PASS, DEFERRED:: printColl
PROCEDURE(printEM_interface), PASS, DEFERRED:: printEM
PROCEDURE(readMesh_interface), DEFERRED, PASS:: readMesh
PROCEDURE, PASS:: printOutput
PROCEDURE, PASS:: printColl
PROCEDURE, PASS:: printEM
END TYPE meshGeneric
@ -266,15 +256,6 @@ MODULE moduleMesh
END SUBROUTINE readMesh_interface
!Prints output variables
SUBROUTINE printOutput_interface(self, t)
IMPORT meshGeneric
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
END SUBROUTINE printOutput_interface
!Prints number of collisions
SUBROUTINE printColl_interface(self, t)
IMPORT meshGeneric
@ -297,4 +278,309 @@ MODULE moduleMesh
!Generic mesh
CLASS(meshGeneric), ALLOCATABLE, TARGET:: mesh
CONTAINS
!Find next cell for particle
RECURSIVE SUBROUTINE findCell(self, part, oldCell)
USE moduleSpecies
USE OMP_LIB
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: self
CLASS(meshVol), OPTIONAL, INTENT(in):: oldCell
CLASS(particle), INTENT(inout), TARGET:: part
REAL(8):: xi(1:3)
CLASS(*), POINTER:: nextElement
xi = self%phy2log(part%r)
!Checks if particle is inside 'self' cell
IF (self%inside(xi)) THEN
part%vol = self%n
part%xi = xi
part%n_in = .TRUE.
!Assign particle to listPart_in
CALL OMP_SET_LOCK(self%lock)
CALL self%listPart_in%add(part)
self%totalWeight = self%totalWeight + part%weight
CALL OMP_UNSET_LOCK(self%lock)
ELSE
!If not, searches for a neighbour and repeats the process.
CALL self%nextElement(xi, nextElement)
!Defines the next step
SELECT TYPE(nextElement)
CLASS IS(meshVol)
!Particle moved to new cell, repeat find procedure
CALL nextElement%findCell(part, self)
CLASS IS (meshEdge)
!Particle encountered an edge, execute boundary
CALL nextElement%fBoundary(part)
!If particle is still inside the domain, call findCell
IF (part%n_in) THEN
IF(PRESENT(oldCell)) THEN
CALL self%findCell(part, oldCell)
ELSE
CALL self%findCell(part)
END IF
END IF
CLASS DEFAULT
WRITE(*,*) "ERROR, CHECK findCell"
END SELECT
END IF
END SUBROUTINE findCell
!Computes collisions in element
SUBROUTINE collision(self)
USE moduleCollisions
USE moduleSpecies
USE moduleList
use moduleRefParam
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: self
INTEGER:: nPart !Number of particles inside the cell
REAL(8):: pMax !Maximum probability of collision
INTEGER:: rnd !random index
TYPE(particle), POINTER:: part_i, part_j
INTEGER:: n !collision
INTEGER:: ij, k
REAL(8):: sigmaVrelMaxNew
TYPE(pointerArray), ALLOCATABLE:: partTemp(:)
self%nColl = 0
nPart = self%listPart_in%amount
IF (nPart > 1) THEN
pMax = self%totalWeight*self%sigmaVrelMax*tauMin/self%volume
self%nColl = INT(REAL(nPart)*pMax*0.5D0)
!Converts the list of particles to an array for easy access
IF (self%nColl > 0) THEN
partTemp = self%listPart_in%convert2Array()
END IF
DO n = 1, self%nColl
!Select random numbers
rnd = 1 + FLOOR(nPart*RAND())
part_i => partTemp(rnd)%part
rnd = 1 + FLOOR(nPart*RAND())
part_j => partTemp(rnd)%part
ij = interactionIndex(part_i%sp, part_j%sp)
sigmaVrelMaxNew = 0.D0
DO k = 1, interactionMatrix(ij)%amount
CALL interactionMatrix(ij)%collisions(k)%obj%collide(self%sigmaVrelMax, sigmaVrelMaxNew, part_i, part_j)
END DO
!Update maximum cross section*v_rel per each collision
IF (sigmaVrelMaxNew > self%sigmaVrelMax) THEN
self%sigmaVrelMax = sigmaVrelMaxNew
END IF
END DO
END IF
self%totalWeight = 0.D0
!Reset output in nodes
CALL self%resetOutput()
!Erase the list of particles inside the cell
CALL self%listPart_in%erase()
END SUBROUTINE collision
SUBROUTINE printOutput(self, t)
USE moduleRefParam
USE moduleSpecies
USE moduleOutput
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, i
TYPE(outputFormat):: output(1:self%numNodes)
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
time = DBLE(t)*tauMin*ti_ref
DO i = 1, nSpecies
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_' // species(i)%obj%name // '.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Density (m^-3)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
CALL calculateOutput(self%nodes(n)%obj%output(i), output(n), self%nodes(n)%obj%v, species(i)%obj)
WRITE(60, "(I6,ES20.6E3)") n, output(n)%density
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Velocity (m/s)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 3
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%velocity
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Pressure (Pa)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%pressure
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Temperature (K)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%temperature
END DO
WRITE(60, "(A)") '$EndNodeData'
CLOSE (60)
END DO
END SUBROUTINE printOutput
SUBROUTINE printColl(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
IF (collOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_Collisions.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$ElementData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Collisions"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numVols
DO n=1, self%numVols
WRITE(60, "(I6,I10)") n + self%numEdges, self%vols(n)%obj%nColl
END DO
WRITE(60, "(A)") '$EndElementData'
CLOSE(60)
END IF
END SUBROUTINE printColl
SUBROUTINE printEM(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, e
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
REAL(8):: xi(1:3)
xi = (/ 0.D0, 0.D0, 0.D0 /)
IF (emOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_EMField.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (20, file = path // folder // '/' // fileName)
WRITE(20, "(A)") '$MeshFormat'
WRITE(20, "(A)") '2.2 0 8'
WRITE(20, "(A)") '$EndMeshFormat'
WRITE(20, "(A)") '$NodeData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Potential (V)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 1
WRITE(20, *) self%numNodes
DO n=1, self%numNodes
WRITE(20, *) n, self%nodes(n)%obj%emData%phi*Volt_ref
END DO
WRITE(20, "(A)") '$EndNodeData'
WRITE(20, "(A)") '$ElementData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Electric Field (V/m)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 3
WRITE(20, *) self%numVols
DO e=1, self%numVols
WRITE(20, *) e+self%numEdges, self%vols(e)%obj%gatherEF(xi)*EF_ref
END DO
WRITE(20, "(A)") '$EndElementData'
CLOSE(20)
END IF
END SUBROUTINE printEM
END MODULE moduleMesh

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@ -0,0 +1,489 @@
!moduleMesh1D: 1D cartesian module
! x == x
! y == unused
! z == unused
MODULE moduleMesh1D
USE moduleMesh
IMPLICIT NONE
TYPE, PUBLIC, EXTENDS(meshNode):: meshNode1D
!Element coordinates
REAL(8):: x = 0.D0
CONTAINS
PROCEDURE, PASS:: init => initNode1D
PROCEDURE, PASS:: getCoordinates => getCoord1D
END TYPE meshNode1D
TYPE, PUBLIC, ABSTRACT, EXTENDS(meshEdge):: meshEdge1D
!Element coordinates
REAL(8):: x = 0.D0
!Connectivity to nodes
CLASS(meshNode), POINTER:: n1 => NULL()
CONTAINS
PROCEDURE, PASS:: init => initEdge1D
PROCEDURE, PASS:: getNodes => getNodes1D
PROCEDURE, PASS:: randPos => randPos1D
END TYPE meshEdge1D
TYPE, PUBLIC, ABSTRACT, EXTENDS(meshVol):: meshVol1D
CONTAINS
PROCEDURE, PASS:: detJac => detJ1D
PROCEDURE, PASS:: invJac => invJ1D
PROCEDURE(fPsi_interface), DEFERRED, NOPASS:: fPsi
PROCEDURE(dPsi_interface), DEFERRED, NOPASS:: dPsi
PROCEDURE(partialDer_interface), DEFERRED, PASS:: partialDer
END TYPE meshVol1D
ABSTRACT INTERFACE
PURE FUNCTION fPsi_interface(xi) RESULT(fPsi)
REAL(8), INTENT(in):: xi(1:3)
REAL(8), ALLOCATABLE:: fPsi(:)
END FUNCTION fPsi_interface
PURE FUNCTION dPsi_interface(xi) RESULT(dPsi)
REAL(8), INTENT(in):: xi(1:3)
REAL(8), ALLOCATABLE:: dPsi(:,:)
END FUNCTION dPsi_interface
PURE SUBROUTINE partialDer_interface(self, dPsi, dx)
IMPORT meshVol1D
CLASS(meshVol1D), INTENT(in):: self
REAL(8), INTENT(in):: dPsi(1:,1:)
REAL(8), INTENT(out), DIMENSION(1):: dx
END SUBROUTINE partialDer_interface
END INTERFACE
TYPE, PUBLIC, EXTENDS(meshVol1D):: meshVol1DSegm
!Element coordinates
REAL(8):: x(1:2)
!Connectivity to nodes
CLASS(meshNode), POINTER:: n1 => NULL(), n2 => NULL()
!Connectivity to adjacent elements
CLASS(*), POINTER:: e1 => NULL(), e2 => NULL()
REAL(8):: arNodes(1:2)
CONTAINS
PROCEDURE, PASS:: init => initVol1DSegm
PROCEDURE, PASS:: area => areaSegm
PROCEDURE, NOPASS:: fPsi => fPsiSegm
PROCEDURE, NOPASS:: dPsi => dPsiSegm
PROCEDURE, PASS:: partialDer => partialDerSegm
PROCEDURE, PASS:: elemK => elemKSegm
PROCEDURE, PASS:: elemF => elemFSegm
PROCEDURE, NOPASS:: weight => weightSegm
PROCEDURE, NOPASS:: inside => insideSegm
PROCEDURE, PASS:: scatter => scatterSegm
PROCEDURE, PASS:: gatherEF => gatherEFSegm
PROCEDURE, PASS:: getNodes => getNodesSegm
PROCEDURE, PASS:: phy2log => phy2logSegm
PROCEDURE, PASS:: nextElement => nextElementSegm
PROCEDURE, PASS:: resetOutput => resetOutputSegm
END TYPE meshVol1DSegm
CONTAINS
!NODE FUNCTIONS
!Init node element
SUBROUTINE initNode1D(self, n, r)
USE moduleSpecies
USE moduleRefParam
IMPLICIT NONE
CLASS(meshNode1D), INTENT(out):: self
INTEGER, INTENT(in):: n
REAL(8), INTENT(in):: r(1:3)
self%n = n
self%x = r(1)/L_ref
!Node volume, to be determined in mesh
self%v = 0.D0
!Allocates output
ALLOCATE(self%output(1:nSpecies))
END SUBROUTINE initNode1D
FUNCTION getCoord1D(self) RESULT(r)
IMPLICIT NONE
CLASS(meshNode1D):: self
REAL(8):: r(1:3)
r = (/ self%x, 0.D0, 0.D0 /)
END FUNCTION getCoord1D
!EDGE FUNCTIONS
!Inits edge element
SUBROUTINE initEdge1D(self, n, p, bt, physicalSurface)
IMPLICIT NONE
CLASS(meshEdge1D), INTENT(out):: self
INTEGER, INTENT(in):: n
INTEGER, INTENT(in):: p(:)
INTEGER, INTENT(in):: bt
INTEGER, INTENT(in):: physicalSurface
REAL(8), DIMENSION(1:3):: r1
self%n = n
self%n1 => mesh%nodes(p(1))%obj
!Get element coordinates
r1 = self%n1%getCoordinates()
self%x = r1(1)
self%normal = (/ 1.D0, 0.D0, 0.D0 /)
!Boundary index
self%bt = bt
!Physical Surface
self%physicalSurface = physicalSurface
END SUBROUTINE initEdge1D
!Get nodes from edge
PURE FUNCTION getNodes1D(self) RESULT(n)
IMPLICIT NONE
CLASS(meshEdge1D), INTENT(in):: self
INTEGER, ALLOCATABLE:: n(:)
ALLOCATE(n(1))
n = (/ self%n1%n /)
END FUNCTION getNodes1D
!Calculates a 'random' position in edge
FUNCTION randPos1D(self) RESULT(r)
CLASS(meshEdge1D), INTENT(in):: self
REAL(8):: r(1:3)
r = (/ self%x, 0.D0, 0.D0 /)
END FUNCTION randPos1D
!VOLUME FUNCTIONS
!SEGMENT FUNCTIONS
!Init segment element
SUBROUTINE initVol1DSegm(self, n, p)
USE moduleRefParam
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(out):: self
INTEGER, INTENT(in):: n
INTEGER, INTENT(in):: p(:)
REAL(8), DIMENSION(1:3):: r1, r2
self%n = n
self%n1 => mesh%nodes(p(1))%obj
self%n2 => mesh%nodes(p(2))%obj
!Get element coordinates
r1 = self%n1%getCoordinates()
r2 = self%n2%getCoordinates()
self%x = (/ r1(1), r2(1) /)
!Assign node volume
CALL self%area()
self%n1%v = self%n1%v + self%arNodes(1)
self%n2%v = self%n2%v + self%arNodes(2)
self%sigmaVrelMax = sigma_ref/L_ref**2
CALL OMP_INIT_LOCK(self%lock)
END SUBROUTINE initVol1DSegm
!Computes element area
PURE SUBROUTINE areaSegm(self)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(inout):: self
REAL(8):: l !element length
REAL(8):: fPsi(1:2)
REAL(8):: detJ
REAL(8):: Xii(1:3)
self%volume = 0.D0
self%arNodes = 0.D0
!1 point Gauss integral
Xii = 0.D0
fPsi = self%fPsi(Xii)
detJ = self%detJac(Xii)
l = 2.D0*detJ
self%volume = l
self%arNodes = fPsi*l
END SUBROUTINE areaSegm
!Computes element functions at point xii
PURE FUNCTION fPsiSegm(xi) RESULT(fPsi)
IMPLICIT NONE
REAL(8), INTENT(in):: xi(1:3)
REAL(8), ALLOCATABLE:: fPsi(:)
ALLOCATE(fPsi(1:2))
fPsi(1) = 1.D0 - xi(1)
fPsi(2) = 1.D0 + xi(1)
fPsi = fPsi * 5.D-1
END FUNCTION fPsiSegm
!Computes element derivative shape function at Xii
PURE FUNCTION dPsiSegm(xi) RESULT(dPsi)
IMPLICIT NONE
REAL(8), INTENT(in):: xi(1:3)
REAL(8), ALLOCATABLE:: dPsi(:,:)
ALLOCATE(dPsi(1:1, 1:2))
dPsi(1, 1) = -5.D-1
dPsi(1, 2) = 5.D-1
END FUNCTION dPsiSegm
!Computes partial derivatives of coordinates
PURE SUBROUTINE partialDerSegm(self, dPsi, dx)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8), INTENT(in):: dPsi(1:,1:)
REAL(8), INTENT(out), DIMENSION(1):: dx
dx(1) = DOT_PRODUCT(dPsi(1,:), self%x)
END SUBROUTINE partialDerSegm
!Computes local stiffness matrix
PURE FUNCTION elemKSegm(self) RESULT(ke)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8):: ke(1:2,1:2)
REAL(8):: Xii(1:3)
REAL(8):: dPsi(1:1, 1:2)
REAL(8):: invJ
ke = 0.D0
Xii = (/ 0.D0, 0.D0, 0.D0 /)
dPsi = self%dPsi(Xii)
invJ = self%invJac(Xii, dPsi)
ke(1,:) = (/ dPsi(1,1)*dPsi(1,1), dPsi(1,1)*dPsi(1,2) /)
ke(2,:) = (/ dPsi(1,2)*dPsi(1,1), dPsi(1,2)*dPsi(1,2) /)
ke = 2.D0*ke*invJ
END FUNCTION elemKSegm
PURE FUNCTION elemFSegm(self, source) RESULT(localF)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8), INTENT(in):: source(1:)
REAL(8), ALLOCATABLE:: localF(:)
REAL(8):: fPsi(1:2)
REAL(8):: detJ
REAL(8):: Xii(1:3)
Xii = 0.D0
fPsi = self%fPsi(Xii)
detJ = self%detJac(Xii)
ALLOCATE(localF(1:2))
localF = 2.D0*DOT_PRODUCT(fPsi, source)*detJ
END FUNCTION elemFSegm
PURE FUNCTION weightSegm(xi) RESULT(w)
IMPLICIT NONE
REAL(8), INTENT(in):: xi(1:3)
REAL(8):: w(1:3)
w = fPsiSegm(xi)
END FUNCTION weightSegm
PURE FUNCTION insideSegm(xi) RESULT(ins)
IMPLICIT NONE
REAL(8), INTENT(in):: xi(1:3)
LOGICAL:: ins
ins = xi(1) >=-1.D0 .AND. &
xi(1) <= 1.D0
END FUNCTION insideSegm
SUBROUTINE scatterSegm(self, part)
USE moduleOutput
USE moduleSpecies
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
CLASS(particle), INTENT(in):: part
TYPE(outputNode), POINTER:: vertex
REAL(8):: w_p(1:2)
REAL(8):: tensorS(1:3,1:3)
w_p = self%weight(part%xi)
tensorS = outerProduct(part%v, part%v)
vertex => self%n1%output(part%sp)
vertex%den = vertex%den + part%weight*w_p(1)
vertex%mom(:) = vertex%mom(:) + part%weight*w_p(1)*part%v(:)
vertex%tensorS(:,:) = vertex%tensorS(:,:) + part%weight*w_p(1)*tensorS
vertex => self%n2%output(part%sp)
vertex%den = vertex%den + part%weight*w_p(2)
vertex%mom(:) = vertex%mom(:) + part%weight*w_p(2)*part%v(:)
vertex%tensorS(:,:) = vertex%tensorS(:,:) + part%weight*w_p(2)*tensorS
END SUBROUTINE scatterSegm
!Gathers EF at position Xii
PURE FUNCTION gatherEFSegm(self, xi) RESULT(EF)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8), INTENT(in):: xi(1:3)
REAL(8):: dPsi(1, 1:2)
REAL(8):: phi(1:2)
REAL(8):: EF(1:3)
REAL(8):: invJ
phi = (/ self%n1%emData%phi, &
self%n2%emData%phi /)
dPsi = self%dPsi(xi)
invJ = self%invJac(xi, dPsi)
EF(1) = -DOT_PRODUCT(dPsi(1, :), phi)*invJ
EF(2) = 0.D0
EF(3) = 0.D0
END FUNCTION gatherEFSegm
!Get nodes from segment
PURE FUNCTION getNodesSegm(self) RESULT(n)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
INTEGER, ALLOCATABLE:: n(:)
ALLOCATE(n(1:2))
n = (/ self%n1%n, self%n2%n /)
END FUNCTION getNodesSegm
PURE FUNCTION phy2logSegm(self, r) RESULT(xN)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8), INTENT(in):: r(1:3)
REAL(8):: xN(1:3)
xN = 0.D0
xN(1) = 2.D0*(r(1) - self%x(1))/(self%x(2) - self%x(1)) - 1.D0
END FUNCTION phy2logSegm
!Get next element for a logical position xi
SUBROUTINE nextElementSegm(self, xi, nextElement)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(in):: self
REAL(8), INTENT(in):: xi(1:3)
CLASS(*), POINTER, INTENT(out):: nextElement
NULLIFY(nextElement)
IF (xi(1) < -1.D0) THEN
nextElement => self%e2
ELSEIF (xi(1) > 1.D0) THEN
nextElement => self%e1
END IF
END SUBROUTINE nextElementSegm
!Reset the output of nodes in element
PURE SUBROUTINE resetOutputSegm(self)
USE moduleSpecies
USE moduleOutput
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(inout):: self
INTEGER:: k
DO k = 1, nSpecies
self%n1%output(k)%den = 0.D0
self%n1%output(k)%mom = 0.D0
self%n1%output(k)%tensorS = 0.D0
self%n2%output(k)%den = 0.D0
self%n2%output(k)%mom = 0.D0
self%n2%output(k)%tensorS = 0.D0
END DO
END SUBROUTINE resetOutputSegm
!COMMON FUNCTIONS FOR 1D VOLUME ELEMENTS
!Computes the element Jacobian determinant
PURE FUNCTION detJ1D(self, xi, dPsi_in) RESULT(dJ)
IMPLICIT NONE
CLASS(meshVol1D), INTENT(in):: self
REAL(8), INTENT(in):: xi(1:3)
REAL(8), INTENT(in), OPTIONAL:: dPsi_in(1:,1:)
REAL(8), ALLOCATABLE:: dPsi(:,:)
REAL(8):: dJ
REAL(8):: dx(1)
IF (PRESENT(dPsi_in)) THEN
dPsi = dPsi_in
ELSE
dPsi = self%dPsi(xi)
END IF
CALL self%partialDer(dPsi, dx)
dJ = dx(1)
END FUNCTION detJ1D
!Computes the invers Jacobian
PURE FUNCTION invJ1D(self, xi, dPsi_in) RESULT(invJ)
IMPLICIT NONE
CLASS(meshVol1D), INTENT(in):: self
REAL(8), INTENT(in):: xi(1:3)
REAL(8), INTENT(in), OPTIONAL:: dPsi_in(1:,1:)
REAL(8), ALLOCATABLE:: dPsi(:,:)
REAL(8):: dx(1)
REAL(8):: invJ
IF (PRESENT(dPsi_in)) THEN
dPsi = dPsi_in
ELSE
dPsi = self%dPsi(xi)
END IF
CALL self%partialDer(dPsi, dx)
invJ = 1.D0/dx(1)
END FUNCTION invJ1D
END MODULE moduleMesh1D

View file

@ -0,0 +1,40 @@
MODULE moduleMesh1DBoundary
USE moduleMesh1D
TYPE, PUBLIC, EXTENDS(meshEdge1D):: meshEdge1DRef
CONTAINS
PROCEDURE, PASS:: fBoundary => reflection
END TYPE meshEdge1DRef
TYPE, PUBLIC, EXTENDS(meshEdge1D):: meshEdge1DAbs
CONTAINS
PROCEDURE, PASS:: fBoundary => absorption
END TYPE meshEdge1DAbs
CONTAINS
SUBROUTINE reflection(self, part)
USE moduleSpecies
IMPLICIT NONE
CLASS(meshEdge1DRef), INTENT(inout):: self
CLASS(particle), INTENT(inout):: part
part%v(1) = -part%v(1)
part%r(1) = 2.D0*self%x - part%r(1)
END SUBROUTINE reflection
SUBROUTINE absorption(self, part)
USE moduleSpecies
IMPLICIT NONE
CLASS(meshEdge1DAbs), INTENT(inout):: self
CLASS(particle), INTENT(inout):: part
part%n_in = .FALSE.
END SUBROUTINE absorption
END MODULE moduleMesh1DBoundary

View file

@ -0,0 +1,243 @@
MODULE moduleMesh1DRead
USE moduleMesh
USE moduleMesh1D
USE moduleMesh1DBoundary
TYPE, EXTENDS(meshGeneric):: mesh1DGeneric
CONTAINS
PROCEDURE, PASS:: readMesh => readMesh1D
END TYPE
INTERFACE connected
MODULE PROCEDURE connectedVolVol, connectedVolEdge
END INTERFACE connected
CONTAINS
SUBROUTINE readMesh1D(self, filename)
USE moduleBoundary
IMPLICIT NONE
CLASS(mesh1DGeneric), INTENT(out):: self
CHARACTER(:), ALLOCATABLE, INTENT(in):: filename
REAL(8):: x
INTEGER:: p(1:2)
INTEGER:: e, et, n, eTemp, elemType, bt
INTEGER:: totalNumElem
INTEGER:: boundaryType
!Open file mesh
OPEN(10, FILE=TRIM(filename))
!Skip header
READ(10, *)
READ(10, *)
READ(10, *)
READ(10, *)
!Read number of nodes
READ(10, *) self%numNodes
!Allocate required matrices and vectors
ALLOCATE(self%nodes(1:self%numNodes))
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
self%K = 0.D0
self%IPIV = 0
!Read nodes coordinates. Only relevant for x
DO e = 1, self%numNodes
READ(10, *) n, x
ALLOCATE(meshNode1D:: self%nodes(n)%obj)
CALL self%nodes(n)%obj%init(n, (/ x, 0.D0, 0.D0 /))
END DO
!Skips comments
READ(10, *)
READ(10, *)
!Reads the total number of elements (edges+vol)
READ(10, *) totalNumElem
self%numEdges = 0
DO e = 1, totalNumElem
READ(10, *) eTemp, elemType
IF (elemType == 15) THEN !15 is physical node in GMSH
self%numEdges = e
END IF
END DO
!Substract the number of edges to the total number of elements
!to obtain the number of volume elements
self%numVols = totalNumelem - self%numEdges
!Allocates arrays
ALLOCATE(self%edges(1:self%numEdges))
ALLOCATE(self%vols(1:self%numVols))
!Go back to the beginning of reading elements
DO e = 1, totalNumelem
BACKSPACE(10)
END DO
!Reads edges
DO e = 1, self%numEdges
READ(10, *) n, elemType, eTemp, boundaryType, eTemp, p(1)
!Associate boundary condition
bt = getBoundaryId(boundaryType)
SELECT CASE(boundary(bt)%obj%boundaryType)
CASE ('reflection')
ALLOCATE(meshEdge1DRef:: self%edges(e)%obj)
CASE ('absorption')
ALLOCATE(meshEdge1DAbs:: self%edges(e)%obj)
END SELECT
CALL self%edges(e)%obj%init(n, p(1:1), bt, boundaryType)
END DO
!Read and initialize volumes
DO e = 1, self%numVols
READ(10, *) n, elemType, eTemp, eTemp, eTemp, p(1:2)
ALLOCATE(meshVol1DSegm:: self%vols(e)%obj)
CALL self%vols(e)%obj%init(n - self%numEdges, p(1:2))
END DO
CLOSE(10)
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END IF
END DO
!Connectivity betwen vols and edges
DO et = 1, self%numEdges
CALL connected(self%vols(e)%obj, self%edges(et)%obj)
END DO
!Constructs the global K matrix
CALL constructGlobalK(self%K, self%vols(e)%obj)
END DO
END SUBROUTINE readMesh1D
SUBROUTINE connectedVolVol(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshVol), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS(meshVol1DSegm)
SELECT TYPE(elemB)
TYPE IS(meshVol1DSegm)
CALL connectedSegmSegm(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolVol
SUBROUTINE connectedSegmSegm(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(inout), TARGET:: elemA
CLASS(meshVol1DSegm), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n2%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmSegm
SUBROUTINE connectedVolEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol), INTENT(inout):: elemA
CLASS(meshEdge), INTENT(inout):: elemB
SELECT TYPE(elemA)
TYPE IS (meshVol1DSegm)
SELECT TYPE(elemB)
CLASS IS(meshEdge1D)
CALL connectedSegmEdge(elemA, elemB)
END SELECT
END SELECT
END SUBROUTINE connectedVolEdge
SUBROUTINE connectedSegmEdge(elemA, elemB)
IMPLICIT NONE
CLASS(meshVol1DSegm), INTENT(inout), TARGET:: elemA
CLASS(meshEdge1D), INTENT(inout), TARGET:: elemB
IF (.NOT. ASSOCIATED(elemA%e1) .AND. &
elemA%n2%n == elemB%n1%n) THEN
elemA%e1 => elemB
elemB%e2 => elemA
END IF
IF (.NOT. ASSOCIATED(elemA%e2) .AND. &
elemA%n1%n == elemB%n1%n) THEN
elemA%e2 => elemB
elemB%e1 => elemA
END IF
END SUBROUTINE connectedSegmEdge
SUBROUTINE constructGlobalK(K, elem)
IMPLICIT NONE
REAL(8), INTENT(inout):: K(1:,1:)
CLASS(meshVol), INTENT(in):: elem
REAL(8):: localK(1:2,1:2)
INTEGER:: i, j
INTEGER:: n(1:2)
SELECT TYPE(elem)
TYPE IS(meshVol1DSegm)
localK = elem%elemK()
n = (/ elem%n1%n, elem%n2%n /)
CLASS DEFAULT
n = 0
localK = 0.D0
END SELECT
DO i = 1, 2
DO j = 1, 2
K(n(i), n(j)) = K(n(i), n(j)) + localK(i, j)
END DO
END DO
END SUBROUTINE constructGlobalK
END MODULE moduleMesh1DRead

View file

@ -37,8 +37,6 @@ MODULE moduleMeshCyl
TYPE, PUBLIC, ABSTRACT, EXTENDS(meshVol):: meshVolCyl
CONTAINS
PROCEDURE, PASS:: collision => collision2DCyl
PROCEDURE, PASS:: findCell => findCellCyl
PROCEDURE, PASS:: detJac => detJCyl
PROCEDURE, PASS:: invJac => invJCyl
PROCEDURE(fPsi_interface), DEFERRED, NOPASS:: fPsi
@ -176,7 +174,7 @@ MODULE moduleMeshCyl
INTEGER, INTENT(in):: p(:)
INTEGER, INTENT(in):: bt
INTEGER, INTENT(in):: physicalSurface
REAL(8):: r1(1:3), r2(1:3)
REAL(8), DIMENSION(1:3):: r1, r2
self%n = n
self%n1 => mesh%nodes(p(1))%obj
@ -581,7 +579,7 @@ MODULE moduleMeshCyl
END SUBROUTINE nextElementQuad
!Reset the output of nodes in tria element
!Reset the output of nodes in quad element
PURE SUBROUTINE resetOutputQuad(self)
USE moduleSpecies
USE moduleOutput
@ -1021,122 +1019,4 @@ MODULE moduleMeshCyl
END FUNCTION invJCyl
!Find next cell for particle
RECURSIVE SUBROUTINE findCellCyl(self, part, oldCell)
USE moduleSpecies
USE OMP_LIB
IMPLICIT NONE
CLASS(meshVolCyl), INTENT(inout):: self
CLASS(meshVol), OPTIONAL, INTENT(in):: oldCell
CLASS(particle), INTENT(inout), TARGET:: part
REAL(8):: xi(1:3)
CLASS(*), POINTER:: nextElement
xi = self%phy2log(part%r)
!Checks if particle is inside 'self' cell
IF (self%inside(xi)) THEN
part%vol = self%n
part%xi = xi
part%n_in = .TRUE.
!Assign particle to listPart_in
CALL OMP_SET_LOCK(self%lock)
CALL self%listPart_in%add(part)
self%totalWeight = self%totalWeight + part%weight
CALL OMP_UNSET_LOCK(self%lock)
ELSE
!If not, searches for a neighbour and repeats the process.
CALL self%nextElement(xi, nextElement)
!Defines the next step
SELECT TYPE(nextElement)
CLASS IS(meshVolCyl)
!Particle moved to new cell, repeat find procedure
CALL nextElement%findCell(part, self)
CLASS IS (meshEdgeCyl)
!Particle encountered an edge, execute boundary
CALL nextElement%fBoundary(part)
!If particle is still inside the domain, call findCell
IF (part%n_in) THEN
IF(PRESENT(oldCell)) THEN
CALL self%findCell(part, oldCell)
ELSE
CALL self%findCell(part)
END IF
END IF
CLASS DEFAULT
WRITE(*,*) "ERROR, CHECK findCellCylQuad"
END SELECT
END IF
END SUBROUTINE findCellCyl
!Computes collisions in element
SUBROUTINE collision2DCyl(self)
USE moduleCollisions
USE moduleSpecies
USE moduleList
use moduleRefParam
IMPLICIT NONE
CLASS(meshVolCyl), INTENT(inout):: self
INTEGER:: nPart !Number of particles inside the cell
REAL(8):: pMax !Maximum probability of collision
INTEGER:: rnd !random index
TYPE(particle), POINTER:: part_i, part_j
INTEGER:: n !collision
INTEGER:: ij, k
REAL(8):: sigmaVrelMaxNew
TYPE(pointerArray), ALLOCATABLE:: partTemp(:)
self%nColl = 0
nPart = self%listPart_in%amount
IF (nPart > 1) THEN
pMax = self%totalWeight*self%sigmaVrelMax*tauMin/self%volume
self%nColl = INT(REAL(nPart)*pMax*0.5D0)
!Converts the list of particles to an array for easy access
IF (self%nColl > 0) THEN
partTemp = self%listPart_in%convert2Array()
END IF
DO n = 1, self%nColl
!Select random numbers
rnd = 1 + FLOOR(nPart*RAND())
part_i => partTemp(rnd)%part
rnd = 1 + FLOOR(nPart*RAND())
part_j => partTemp(rnd)%part
ij = interactionIndex(part_i%sp, part_j%sp)
sigmaVrelMaxNew = 0.D0
DO k = 1, interactionMatrix(ij)%amount
CALL interactionMatrix(ij)%collisions(k)%obj%collide(self%sigmaVrelMax, sigmaVrelMaxNew, part_i, part_j)
END DO
!Update maximum cross section*v_rel per each collision
IF (sigmaVrelMaxNew > self%sigmaVrelMax) THEN
self%sigmaVrelMax = sigmaVrelMaxNew
END IF
END DO
END IF
self%totalWeight = 0.D0
!Reset output in nodes
CALL self%resetOutput()
!Erase the list of particles inside the cell
CALL self%listPart_in%erase()
END SUBROUTINE collision2DCyl
END MODULE moduleMeshCyl

View file

@ -5,10 +5,7 @@ MODULE moduleMeshCylRead
TYPE, EXTENDS(meshGeneric):: meshCylGeneric
CONTAINS
PROCEDURE, PASS:: readMesh => readMeshCyl
PROCEDURE, PASS:: printOutput => printOutputCyl
PROCEDURE, PASS:: printColl => printCollisionsCyl
PROCEDURE, PASS:: printEM => printEMCyl
PROCEDURE, PASS:: readMesh => readMeshCyl
END TYPE
@ -19,7 +16,6 @@ MODULE moduleMeshCylRead
CONTAINS
SUBROUTINE readMeshCyl(self, filename)
USE moduleRefParam
USE moduleBoundary
IMPLICIT NONE
@ -82,7 +78,6 @@ MODULE moduleMeshCylRead
DO e=1, self%numEdges
READ(10,*) n, elemType, eTemp, boundaryType, eTemp, p(1:2)
!Associate boundary condition procedure.
!TODO: move to subroutine
bt = getBoundaryId(boundaryType)
SELECT CASE(boundary(bt)%obj%boundaryType)
CASE ('reflection')
@ -120,7 +115,6 @@ MODULE moduleMeshCylRead
END SELECT
END DO
CLOSE(10)
@ -128,12 +122,12 @@ MODULE moduleMeshCylRead
!Build connectivity between elements
DO e = 1, self%numVols
!Connectivity between volumes
IF (e /= et) THEN
DO et = 1, self%numVols
DO et = 1, self%numVols
IF (e /= et) THEN
CALL connected(self%vols(e)%obj, self%vols(et)%obj)
END DO
END IF
END IF
END DO
!Connectivity between vols and edges
DO et = 1, self%numEdges
@ -588,194 +582,4 @@ MODULE moduleMeshCylRead
END SUBROUTINE constructGlobalK
SUBROUTINE printOutputCyl(self, t)
USE moduleRefParam
USE moduleSpecies
USE moduleOutput
IMPLICIT NONE
CLASS(meshCylGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, i
TYPE(outputFormat):: output(1:self%numNodes)
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
time = DBLE(t)*tauMin*ti_ref
DO i = 1, nSpecies
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_' // species(i)%obj%name // '.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Density (m^-3)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
CALL calculateOutput(self%nodes(n)%obj%output(i), output(n), self%nodes(n)%obj%v, species(i)%obj)
WRITE(60, "(I6,ES20.6E3)") n, output(n)%density
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Velocity (m/s)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 3
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%velocity
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Pressure (Pa)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%pressure
END DO
WRITE(60, "(A)") '$EndNodeData'
WRITE(60, "(A)") '$NodeData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Temperature (K)"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numNodes
DO n=1, self%numNodes
WRITE(60, "(I6,3(ES20.6E3))") n, output(n)%temperature
END DO
WRITE(60, "(A)") '$EndNodeData'
CLOSE (60)
END DO
END SUBROUTINE printOutputCyl
SUBROUTINE printCollisionsCyl(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshCylGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
IF (collOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_Collisions.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (60, file = path // folder // '/' // fileName)
WRITE(60, "(A)") '$MeshFormat'
WRITE(60, "(A)") '2.2 0 8'
WRITE(60, "(A)") '$EndMeshFormat'
WRITE(60, "(A)") '$ElementData'
WRITE(60, "(A)") '1'
WRITE(60, "(A)") '"Collisions"'
WRITE(60, *) 1
WRITE(60, *) time
WRITE(60, *) 3
WRITE(60, *) t
WRITE(60, *) 1
WRITE(60, *) self%numVols
DO n=1, self%numVols
WRITE(60, "(I6,I10)") n + self%numEdges, self%vols(n)%obj%nColl
END DO
WRITE(60, "(A)") '$EndElementData'
CLOSE(60)
END IF
END SUBROUTINE printCollisionsCyl
SUBROUTINE printEMCyl(self, t)
USE moduleRefParam
USE moduleCaseParam
USE moduleOutput
IMPLICIT NONE
CLASS(meshCylGeneric), INTENT(in):: self
INTEGER, INTENT(in):: t
INTEGER:: n, e
REAL(8):: time
CHARACTER(:), ALLOCATABLE:: fileName
CHARACTER (LEN=6):: tstring !TODO: Review to allow any number of iterations
REAL(8):: xi(1:3)
IF (emOutput) THEN
time = DBLE(t)*tauMin*ti_ref
WRITE(tstring, '(I6.6)') t
fileName='OUTPUT_' // tstring// '_EMField.msh'
WRITE(*, "(6X,A15,A)") "Creating file: ", fileName
OPEN (20, file = path // folder // '/' // fileName)
WRITE(20, "(A)") '$MeshFormat'
WRITE(20, "(A)") '2.2 0 8'
WRITE(20, "(A)") '$EndMeshFormat'
WRITE(20, "(A)") '$NodeData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Potential (V)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 1
WRITE(20, *) self%numNodes
DO n=1, self%numNodes
WRITE(20, *) n, self%nodes(n)%obj%emData%phi*Volt_ref
END DO
WRITE(20, "(A)") '$EndNodeData'
WRITE(20, "(A)") '$ElementData'
WRITE(20, "(A)") '1'
WRITE(20, "(A)") '"Electric Field (V/m)"'
WRITE(20, *) 1
WRITE(20, *) time
WRITE(20, *) 3
WRITE(20, *) t
WRITE(20, *) 3
WRITE(20, *) self%numVols
DO e=1, self%numVols
SELECT TYPE(elem=>self%vols(e)%obj)
TYPE IS(meshVolCylQuad)
xi = (/ 0.D0, 0.D0, 0.D0 /)
TYPE IS(meshVolCylTria)
xi = (/ 1.D0/3.D0, 1.D0/3.D0, 0.D0 /)
END SELECT
WRITE(20, *) e+self%numEdges, self%vols(e)%obj%gatherEF(xi)*EF_ref
END DO
WRITE(20, "(A)") '$EndElementData'
CLOSE(20)
END IF
END SUBROUTINE printEMCyl
END MODULE moduleMeshCylRead

View file

@ -72,6 +72,9 @@ MODULE moduleSolver
CASE('2DCylCharged')
self%pushParticle => pushCylCharged
CASE('1DCartCharged')
self%pushParticle => push1DCharged
CASE DEFAULT
CALL criticalError('Solver ' // pusherType // ' not found','readCase')
@ -227,6 +230,33 @@ MODULE moduleSolver
END SUBROUTINE pushCylCharged
!Push charged particles in 1D cartesian coordinates
PURE SUBROUTINE push1DCharged(part)
USE moduleSPecies
USE moduleEM
IMPLICIT NONE
TYPE(particle), INTENT(inout):: part
TYPE(particle):: part_temp
REAL(8):: tauSp
REAL(8):: qmEFt(1:3)
part_temp = part
!Time step for particle species
tauSp = tau(part_temp%sp)
!Get the electric field at particle position
qmEFt = part_temp%qm*gatherElecField(part_temp)*tauSp
!x
part_temp%v(1) = part%v(1) + qmEFt(1)
part_temp%r(1) = part%r(1) + part_temp%v(1)*tauSp
part_temp%n_in = .FALSE.
part = part_temp
END SUBROUTINE push1DCharged
!Do the collisions in all the cells
SUBROUTINE doCollisions()
USE moduleMesh