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d5bcf8ce50
16 changed files with 953 additions and 550 deletions
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46.719 54.863 c 46.957 54.582 47.125 54.348 47.219 54.16 c 47.32 53.965
|
||||||
|
47.375 53.777 47.375 53.598 c 47.375 53.297 47.266 53.051 47.047 52.863
|
||||||
|
c 46.836 52.668 46.566 52.566 46.234 52.566 c 45.992 52.566 45.738 52.609
|
||||||
|
45.469 52.691 c 45.195 52.777 44.91 52.902 44.609 53.066 c 44.609 52.301
|
||||||
|
l 44.922 52.176 45.207 52.082 45.469 52.02 c 45.738 51.957 45.988 51.926
|
||||||
|
46.219 51.926 c 46.801 51.926 47.27 52.074 47.625 52.363 c 47.977 52.656
|
||||||
|
48.156 53.047 48.156 53.535 c 48.156 53.777 48.109 54 48.016 54.207 c 47.93
|
||||||
|
54.418 47.773 54.66 47.547 54.941 c 47.484 55.016 47.281 55.23 46.938 55.582
|
||||||
|
c 46.594 55.938 46.113 56.434 45.5 57.066 c h
|
||||||
|
45.5 57.066 m f
|
||||||
|
93.52 47.684 m 91.91 52.027 l 95.129 52.027 l h
|
||||||
|
92.848 46.512 m 94.191 46.512 l 97.52 55.262 l 96.285 55.262 l 95.488 53.012
|
||||||
|
l 91.551 53.012 l 90.754 55.262 l 89.504 55.262 l h
|
||||||
|
92.848 46.512 m f
|
||||||
|
98.582 57.02 m 99.832 57.02 l 99.832 52.676 l 98.473 52.957 l 98.473 52.254
|
||||||
|
l 99.832 51.973 l 100.598 51.973 l 100.598 57.02 l 101.848 57.02 l 101.848
|
||||||
|
57.66 l 98.582 57.66 l h
|
||||||
|
98.582 57.02 m f
|
||||||
|
45.98 98.063 m 44.371 102.406 l 47.59 102.406 l h
|
||||||
|
45.309 96.891 m 46.652 96.891 l 49.98 105.641 l 48.746 105.641 l 47.949
|
||||||
|
103.391 l 44.012 103.391 l 43.215 105.641 l 41.965 105.641 l h
|
||||||
|
45.309 96.891 m f
|
||||||
|
53.23 104.98 m 53.605 105.055 53.895 105.215 54.105 105.465 c 54.313 105.715
|
||||||
|
54.418 106.023 54.418 106.387 c 54.418 106.949 54.219 107.387 53.824 107.699
|
||||||
|
c 53.438 108.004 52.891 108.152 52.184 108.152 c 51.941 108.152 51.699
|
||||||
|
108.125 51.449 108.074 c 51.199 108.035 50.938 107.965 50.668 107.871 c
|
||||||
|
50.668 107.137 l 50.875 107.254 51.105 107.348 51.355 107.418 c 51.613 107.48
|
||||||
|
51.887 107.512 52.168 107.512 c 52.645 107.512 53.012 107.418 53.262 107.23
|
||||||
|
c 53.52 107.035 53.652 106.754 53.652 106.387 c 53.652 106.055 53.531 105.793
|
||||||
|
53.293 105.605 c 53.051 105.418 52.723 105.324 52.309 105.324 c 51.652
|
||||||
|
105.324 l 51.652 104.684 l 52.34 104.684 l 52.723 104.684 53.016 104.613
|
||||||
|
53.215 104.465 c 53.41 104.309 53.512 104.09 53.512 103.809 c 53.512 103.52
|
||||||
|
53.406 103.293 53.199 103.137 c 52.988 102.98 52.691 102.902 52.309 102.902
|
||||||
|
c 52.098 102.902 51.875 102.93 51.637 102.98 c 51.395 103.023 51.129 103.09
|
||||||
|
50.84 103.184 c 50.84 102.496 l 51.129 102.414 51.402 102.355 51.652 102.324
|
||||||
|
c 51.91 102.285 52.156 102.262 52.387 102.262 c 52.969 102.262 53.426 102.398
|
||||||
|
53.762 102.668 c 54.105 102.93 54.277 103.285 54.277 103.73 c 54.277 104.043
|
||||||
|
54.184 104.309 53.996 104.527 c 53.816 104.746 53.563 104.898 53.23 104.98
|
||||||
|
c h
|
||||||
|
53.23 104.98 m f
|
||||||
|
93.707 97.875 m 92.098 102.219 l 95.316 102.219 l h
|
||||||
|
93.035 96.703 m 94.379 96.703 l 97.707 105.453 l 96.473 105.453 l 95.676
|
||||||
|
103.203 l 91.738 103.203 l 90.941 105.453 l 89.691 105.453 l h
|
||||||
|
93.035 96.703 m f
|
||||||
|
100.754 102.836 m 98.801 105.867 l 100.754 105.867 l h
|
||||||
|
100.551 102.164 m 101.52 102.164 l 101.52 105.867 l 102.316 105.867 l 102.316
|
||||||
|
106.508 l 101.52 106.508 l 101.52 107.852 l 100.754 107.852 l 100.754 106.508
|
||||||
|
l 98.176 106.508 l 98.176 105.773 l h
|
||||||
|
100.551 102.164 m f
|
||||||
|
27.949 77.395 m 27.949 80.301 l 27.043 80.301 l 27.043 72.754 l 27.949
|
||||||
|
72.754 l 27.949 73.582 l 28.137 73.262 28.371 73.02 28.652 72.863 c 28.941
|
||||||
|
72.707 29.293 72.629 29.699 72.629 c 30.363 72.629 30.902 72.895 31.309
|
||||||
|
73.426 c 31.723 73.949 31.934 74.637 31.934 75.488 c 31.934 76.355 31.723
|
||||||
|
77.051 31.309 77.582 c 30.902 78.105 30.363 78.363 29.699 78.363 c 29.293
|
||||||
|
78.363 28.941 78.285 28.652 78.129 c 28.371 77.973 28.137 77.73 27.949
|
||||||
|
77.395 c h
|
||||||
|
31.012 75.488 m 31.012 74.832 30.871 74.316 30.59 73.941 c 30.316 73.566
|
||||||
|
29.949 73.379 29.48 73.379 c 29 73.379 28.625 73.566 28.355 73.941 c 28.082
|
||||||
|
74.316 27.949 74.832 27.949 75.488 c 27.949 76.156 28.082 76.676 28.355
|
||||||
|
77.051 c 28.625 77.426 29 77.613 29.48 77.613 c 29.949 77.613 30.316 77.426
|
||||||
|
30.59 77.051 c 30.871 76.676 31.012 76.156 31.012 75.488 c h
|
||||||
|
31.012 75.488 m f
|
||||||
|
35.578 70.629 m 35.148 71.379 34.828 72.125 34.609 72.863 c 34.398 73.594
|
||||||
|
34.297 74.332 34.297 75.082 c 34.297 75.832 34.398 76.578 34.609 77.316
|
||||||
|
c 34.828 78.059 35.148 78.793 35.578 79.535 c 34.797 79.535 l 34.316 78.773
|
||||||
|
33.953 78.027 33.703 77.285 c 33.461 76.547 33.344 75.813 33.344 75.082
|
||||||
|
c 33.344 74.355 33.461 73.625 33.703 72.895 c 33.941 72.156 34.305 71.402
|
||||||
|
34.797 70.629 c h
|
||||||
|
35.578 70.629 m f
|
||||||
|
41.875 72.754 m 39.906 75.41 l 41.984 78.223 l 40.922 78.223 l 39.328 76.066
|
||||||
|
l 37.734 78.223 l 36.672 78.223 l 38.797 75.363 l 36.859 72.754 l 37.922
|
||||||
|
72.754 l 39.375 74.707 l 40.813 72.754 l h
|
||||||
|
41.875 72.754 m f
|
||||||
|
43.121 79.676 m 44.168 79.676 l 44.168 76.066 l 43.027 76.301 l 43.027
|
||||||
|
75.707 l 44.152 75.488 l 44.793 75.488 l 44.793 79.676 l 45.84 79.676 l
|
||||||
|
45.84 80.223 l 43.121 80.223 l h
|
||||||
|
43.121 79.676 m f
|
||||||
|
47.621 76.988 m 48.652 76.988 l 48.652 77.816 l 47.855 79.379 l 47.215
|
||||||
|
79.379 l 47.621 77.816 l h
|
||||||
|
47.621 76.988 m f
|
||||||
|
55.117 72.754 m 53.148 75.41 l 55.227 78.223 l 54.164 78.223 l 52.57 76.066
|
||||||
|
l 50.977 78.223 l 49.914 78.223 l 52.039 75.363 l 50.102 72.754 l 51.164
|
||||||
|
72.754 l 52.617 74.707 l 54.055 72.754 l h
|
||||||
|
55.117 72.754 m f
|
||||||
|
56.801 79.676 m 59.035 79.676 l 59.035 80.223 l 56.02 80.223 l 56.02 79.676
|
||||||
|
l 56.27 79.426 56.602 79.094 57.02 78.676 c 57.434 78.25 57.699 77.973
|
||||||
|
57.816 77.848 c 58.023 77.621 58.164 77.426 58.238 77.27 c 58.32 77.105
|
||||||
|
58.363 76.941 58.363 76.785 c 58.363 76.535 58.273 76.332 58.098 76.176
|
||||||
|
c 57.918 76.02 57.691 75.941 57.41 75.941 c 57.211 75.941 56.996 75.98 56.77
|
||||||
|
76.051 c 56.551 76.113 56.316 76.219 56.066 76.363 c 56.066 75.707 l 56.316
|
||||||
|
75.605 56.551 75.527 56.77 75.473 c 56.996 75.422 57.207 75.395 57.395
|
||||||
|
75.395 c 57.883 75.395 58.273 75.52 58.566 75.77 c 58.855 76.012 59.004
|
||||||
|
76.34 59.004 76.754 c 59.004 76.941 58.965 77.125 58.895 77.301 c 58.82
|
||||||
|
77.48 58.691 77.688 58.504 77.926 c 58.449 77.988 58.277 78.168 57.988 78.457
|
||||||
|
c 57.707 78.75 57.309 79.156 56.801 79.676 c h
|
||||||
|
56.801 79.676 m f
|
||||||
|
60.484 70.629 m 61.266 70.629 l 61.754 71.402 62.117 72.156 62.359 72.895
|
||||||
|
c 62.609 73.625 62.734 74.355 62.734 75.082 c 62.734 75.813 62.609 76.547
|
||||||
|
62.359 77.285 c 62.117 78.027 61.754 78.773 61.266 79.535 c 60.484 79.535
|
||||||
|
l 60.922 78.793 61.242 78.059 61.453 77.316 c 61.672 76.578 61.781 75.832
|
||||||
|
61.781 75.082 c 61.781 74.332 61.672 73.594 61.453 72.863 c 61.242 72.125
|
||||||
|
60.922 71.379 60.484 70.629 c h
|
||||||
|
60.484 70.629 m f
|
||||||
|
Q Q
|
||||||
|
showpage
|
||||||
|
%%Trailer
|
||||||
|
end
|
||||||
|
%%EOF
|
||||||
Binary file not shown.
|
|
@ -1,5 +1,5 @@
|
||||||
\documentclass[10pt,a4paper,twoside]{book}
|
\documentclass[10pt,a4paper,twoside]{book}
|
||||||
%\usepackage[latin1]{inputenc}
|
\usepackage[latin1]{inputenc}
|
||||||
\usepackage{amsmath}
|
\usepackage{amsmath}
|
||||||
\usepackage{amsfonts}
|
\usepackage{amsfonts}
|
||||||
\usepackage{amssymb}
|
\usepackage{amssymb}
|
||||||
|
|
@ -460,10 +460,6 @@ make
|
||||||
\begin{itemize}
|
\begin{itemize}
|
||||||
\item \textbf{gmsh2}: \Gls{gmsh} file format in version 2.0. This has to be in ASCII format.
|
\item \textbf{gmsh2}: \Gls{gmsh} file format in version 2.0. This has to be in ASCII format.
|
||||||
\item \textbf{vtu}: \Gls{vtu} file format. This has to be in ASCII format.
|
\item \textbf{vtu}: \Gls{vtu} file format. This has to be in ASCII format.
|
||||||
\item \textbf{text}: Plain text file format only intended for 1D cases.
|
|
||||||
This has to be in ASCII format and comma separated.
|
|
||||||
The first column represents the position and the second column the physical ID of the node.
|
|
||||||
Values have to be $1$ (left boundary), $2$ (right boundary), or $0$ (no boundary.)
|
|
||||||
\end{itemize}
|
\end{itemize}
|
||||||
\item \textbf{meshFile}: Character.
|
\item \textbf{meshFile}: Character.
|
||||||
Mesh filename.
|
Mesh filename.
|
||||||
|
|
|
||||||
|
|
@ -9,7 +9,6 @@ OBJECTS = $(OBJDIR)/moduleMesh.o $(OBJDIR)/moduleMeshBoundary.o $(OBJDIR)/module
|
||||||
$(OBJDIR)/moduleMeshInputVTU.o $(OBJDIR)/moduleMeshOutputVTU.o \
|
$(OBJDIR)/moduleMeshInputVTU.o $(OBJDIR)/moduleMeshOutputVTU.o \
|
||||||
$(OBJDIR)/moduleMeshInputGmsh2.o $(OBJDIR)/moduleMeshOutputGmsh2.o \
|
$(OBJDIR)/moduleMeshInputGmsh2.o $(OBJDIR)/moduleMeshOutputGmsh2.o \
|
||||||
$(OBJDIR)/moduleMeshInput0D.o $(OBJDIR)/moduleMeshOutput0D.o \
|
$(OBJDIR)/moduleMeshInput0D.o $(OBJDIR)/moduleMeshOutput0D.o \
|
||||||
$(OBJDIR)/moduleMeshInputText.o $(OBJDIR)/moduleMeshOutputText.o \
|
|
||||||
$(OBJDIR)/moduleMesh3DCart.o \
|
$(OBJDIR)/moduleMesh3DCart.o \
|
||||||
$(OBJDIR)/moduleMesh2DCyl.o \
|
$(OBJDIR)/moduleMesh2DCyl.o \
|
||||||
$(OBJDIR)/moduleMesh2DCart.o \
|
$(OBJDIR)/moduleMesh2DCart.o \
|
||||||
|
|
|
||||||
|
|
@ -910,7 +910,6 @@ MODULE moduleInput
|
||||||
USE moduleMeshInputGmsh2, ONLY: initGmsh2
|
USE moduleMeshInputGmsh2, ONLY: initGmsh2
|
||||||
USE moduleMeshInputVTU, ONLY: initVTU
|
USE moduleMeshInputVTU, ONLY: initVTU
|
||||||
USE moduleMeshInput0D, ONLY: init0D
|
USE moduleMeshInput0D, ONLY: init0D
|
||||||
USE moduleMeshInputText, ONLY: initText
|
|
||||||
USE moduleMesh3DCart
|
USE moduleMesh3DCart
|
||||||
USE moduleMesh2DCyl
|
USE moduleMesh2DCyl
|
||||||
USE moduleMesh2DCart
|
USE moduleMesh2DCart
|
||||||
|
|
@ -1059,20 +1058,6 @@ MODULE moduleInput
|
||||||
|
|
||||||
END IF
|
END IF
|
||||||
|
|
||||||
case ("text")
|
|
||||||
!Check if the geometry is right.
|
|
||||||
if (mesh%dimen /= 1) then
|
|
||||||
call criticalError("Text mesh is only allowed for 1D geometries", 'readGeometry')
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
!Read the mesh
|
|
||||||
call initText(mesh)
|
|
||||||
if (doubleMesh) then
|
|
||||||
call initText(meshColl)
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
CASE DEFAULT
|
CASE DEFAULT
|
||||||
CALL criticalError('Mesh format ' // meshFormat // ' not defined.', 'readGeometry')
|
CALL criticalError('Mesh format ' // meshFormat // ' not defined.', 'readGeometry')
|
||||||
|
|
||||||
|
|
|
||||||
|
|
@ -1,4 +1,4 @@
|
||||||
all: vtu.o gmsh2.o 0D.o text.o
|
all: vtu.o gmsh2.o 0D.o
|
||||||
|
|
||||||
vtu.o: moduleMeshInoutCommon.o
|
vtu.o: moduleMeshInoutCommon.o
|
||||||
$(MAKE) -C vtu all
|
$(MAKE) -C vtu all
|
||||||
|
|
@ -9,8 +9,5 @@ gmsh2.o:
|
||||||
0D.o:
|
0D.o:
|
||||||
$(MAKE) -C 0D all
|
$(MAKE) -C 0D all
|
||||||
|
|
||||||
text.o:
|
|
||||||
$(MAKE) -C text all
|
|
||||||
|
|
||||||
%.o: %.f90
|
%.o: %.f90
|
||||||
$(FC) $(FCFLAGS) -c $< -o $(OBJDIR)/$@
|
$(FC) $(FCFLAGS) -c $< -o $(OBJDIR)/$@
|
||||||
|
|
|
||||||
|
|
@ -1,7 +0,0 @@
|
||||||
all: moduleMeshInputText.o moduleMeshOutputText.o
|
|
||||||
|
|
||||||
moduleMeshInputText.o: moduleMeshOutputText.o moduleMeshInputText.f90
|
|
||||||
$(FC) $(FCFLAGS) -c $(subst .o,.f90,$@) -o $(OBJDIR)/$@
|
|
||||||
|
|
||||||
%.o: %.f90
|
|
||||||
$(FC) $(FCFLAGS) -c $< -o $(OBJDIR)/$@
|
|
||||||
|
|
@ -1,232 +0,0 @@
|
||||||
module moduleMeshInputText
|
|
||||||
!The mesh is stored as a column-wise text file.
|
|
||||||
!Aimed for simple geometries in 1D
|
|
||||||
|
|
||||||
contains
|
|
||||||
!Inits the text mesh
|
|
||||||
subroutine initText(self)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleMeshOutputText
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshGeneric), intent(inout), target:: self
|
|
||||||
|
|
||||||
if (associated(meshForMCC,self)) then
|
|
||||||
self%printColl => printCollText
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
select type(self)
|
|
||||||
type is (meshParticles)
|
|
||||||
self%printOutput => printOutputText
|
|
||||||
self%printEM => printEMText
|
|
||||||
self%printAverage => printAverageText
|
|
||||||
|
|
||||||
self%readInitial => readInitialText
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
self%readMesh => readText
|
|
||||||
|
|
||||||
end subroutine initText
|
|
||||||
|
|
||||||
!Reads the text mesh
|
|
||||||
subroutine readText(self, filename)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleMesh1DCart
|
|
||||||
use moduleMesh1DRad
|
|
||||||
use moduleErrors
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshGeneric), intent(inout):: self
|
|
||||||
character(:), allocatable, intent(in):: filename !Dummy file, not used
|
|
||||||
integer:: fileID, reason
|
|
||||||
character(len=256):: line
|
|
||||||
integer:: nNodes
|
|
||||||
real(8):: r(1:3) !dummy 3D coordinate
|
|
||||||
integer:: physicalID
|
|
||||||
integer:: n, c
|
|
||||||
integer, allocatable:: p(:)
|
|
||||||
integer:: bt
|
|
||||||
|
|
||||||
fileID = 10
|
|
||||||
|
|
||||||
open(fileID, file=trim(filename))
|
|
||||||
|
|
||||||
!Skip header
|
|
||||||
read(fileID, *)
|
|
||||||
|
|
||||||
!Get number of nodes
|
|
||||||
nNodes = 0
|
|
||||||
do
|
|
||||||
read(fileID, *, iostat=reason) line
|
|
||||||
|
|
||||||
if (reason > 0) then
|
|
||||||
call criticalError('Error reading mesh file', 'readText')
|
|
||||||
|
|
||||||
else if (reason < 0) then
|
|
||||||
exit
|
|
||||||
|
|
||||||
else if (len(line) > 0) then
|
|
||||||
nNodes = nNodes + 1
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
if (nNodes == 0) then
|
|
||||||
call criticalError('No nodes read in mesh file', 'readText')
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
self%numNodes = nNodes
|
|
||||||
allocate(self%nodes(1:self%numNodes))
|
|
||||||
|
|
||||||
SELECT TYPE(self)
|
|
||||||
TYPE IS(meshParticles)
|
|
||||||
ALLOCATE(self%K(1:self%numNodes, 1:self%numNodes))
|
|
||||||
ALLOCATE(self%IPIV(1:self%numNodes, 1:self%numNodes))
|
|
||||||
self%K = 0.D0
|
|
||||||
self%IPIV = 0
|
|
||||||
|
|
||||||
END SELECT
|
|
||||||
|
|
||||||
self%numCells = nNodes - 1
|
|
||||||
allocate(self%cells(1:self%numCells))
|
|
||||||
|
|
||||||
select type(self)
|
|
||||||
type is (meshParticles)
|
|
||||||
self%numEdges = 2
|
|
||||||
|
|
||||||
allocate(self%edges(1:self%numEdges))
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
!Read the mesh now
|
|
||||||
rewind(fileID)
|
|
||||||
|
|
||||||
!Skip header
|
|
||||||
read(fileID, *)
|
|
||||||
|
|
||||||
!Allocate nodes and edges
|
|
||||||
do n = 1, self%numNodes
|
|
||||||
r = 0.D0
|
|
||||||
|
|
||||||
read(fileID, *) r(1), physicalID
|
|
||||||
|
|
||||||
select case(self%geometry)
|
|
||||||
case("Cart")
|
|
||||||
allocate(meshNode1DCart:: self%nodes(n)%obj)
|
|
||||||
|
|
||||||
case("Rad")
|
|
||||||
allocate(meshNode1DRad:: self%nodes(n)%obj)
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
!Init nodes
|
|
||||||
call self%nodes(n)%obj%init(n, r)
|
|
||||||
|
|
||||||
!Allocate edges if required)
|
|
||||||
select type(self)
|
|
||||||
type is (meshParticles)
|
|
||||||
if ((physicalID == 1) .or. (physicalID == 2)) then
|
|
||||||
select case(self%geometry)
|
|
||||||
case("Cart")
|
|
||||||
allocate(meshEdge1DCart:: self%edges(physicalID)%obj)
|
|
||||||
|
|
||||||
case("Rad")
|
|
||||||
allocate(meshEdge1DRad:: self%edges(physicalID)%obj)
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
allocate(p(1))
|
|
||||||
p(1) = n
|
|
||||||
bt = getBoundaryId(physicalID)
|
|
||||||
call self%edges(physicalID)%obj%init(physicalID, p, physicalID, physicalID)
|
|
||||||
deallocate(p)
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
!Allocate cells
|
|
||||||
n = 1
|
|
||||||
allocate(p(1:2))
|
|
||||||
do c = 1, self%numCells
|
|
||||||
p(1) = n
|
|
||||||
n = n + 1
|
|
||||||
p(2) = n
|
|
||||||
|
|
||||||
select case(self%geometry)
|
|
||||||
case("Cart")
|
|
||||||
allocate(meshCell1DCartSegm:: self%cells(c)%obj)
|
|
||||||
|
|
||||||
case("Rad")
|
|
||||||
allocate(meshCell1DRadSegm:: self%cells(c)%obj)
|
|
||||||
|
|
||||||
end select
|
|
||||||
|
|
||||||
call self%cells(c)%obj%init(c, p, self%nodes)
|
|
||||||
|
|
||||||
|
|
||||||
end do
|
|
||||||
deallocate(p)
|
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
!Call mesh connectivity
|
|
||||||
CALL self%connectMesh
|
|
||||||
|
|
||||||
end subroutine readText
|
|
||||||
|
|
||||||
subroutine readInitialText(filename, density, velocity, temperature)
|
|
||||||
use moduleErrors
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
character(:), allocatable, intent(in):: filename
|
|
||||||
real(8), allocatable, intent(out), dimension(:):: density
|
|
||||||
real(8), allocatable, intent(out), dimension(:,:):: velocity
|
|
||||||
real(8), allocatable, intent(out), dimension(:):: temperature
|
|
||||||
integer:: fileID, reason
|
|
||||||
character(len=256):: line
|
|
||||||
integer:: nNodes
|
|
||||||
integer:: n
|
|
||||||
|
|
||||||
fileID = 10
|
|
||||||
|
|
||||||
open(fileID, file=trim(filename))
|
|
||||||
|
|
||||||
do
|
|
||||||
read(fileID, *, iostat=reason) line
|
|
||||||
|
|
||||||
if (reason > 0) then
|
|
||||||
call criticalError('Error reading mesh file', 'readText')
|
|
||||||
|
|
||||||
else if (reason < 0) then
|
|
||||||
exit
|
|
||||||
|
|
||||||
else if (len(line) > 0) then
|
|
||||||
nNodes = nNodes + 1
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
allocate(density(1:nNodes))
|
|
||||||
allocate(velocity(1:nNodes, 1:3))
|
|
||||||
allocate(temperature(1:nNodes))
|
|
||||||
|
|
||||||
rewind(fileID)
|
|
||||||
|
|
||||||
do n = 1, nNodes
|
|
||||||
read(fileID, *) density(n), velocity(n, 1:3), temperature(n)
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
end subroutine readInitialText
|
|
||||||
|
|
||||||
end module moduleMeshInputText
|
|
||||||
|
|
@ -1,265 +0,0 @@
|
||||||
module moduleMeshOutputText
|
|
||||||
contains
|
|
||||||
|
|
||||||
subroutine writeSpeciesOutput(self, fileID, speciesIndex)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleOutput
|
|
||||||
use moduleRefParam, only: L_ref
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), INTENT(in):: self
|
|
||||||
integer, intent(in):: fileID
|
|
||||||
integer, intent(in):: speciesIndex
|
|
||||||
real(8):: r(1:3)
|
|
||||||
type(outputFormat):: output
|
|
||||||
integer:: n
|
|
||||||
|
|
||||||
do n = 1, self%numNodes
|
|
||||||
r = self%nodes(n)%obj%getCoordinates()
|
|
||||||
call calculateOutput(self%nodes(n)%obj%output(speciesIndex), output, self%nodes(n)%obj%v, species(speciesIndex)%obj)
|
|
||||||
|
|
||||||
write(fileID, '(5(ES0.6E3,","),ES0.6E3)') r(1)*L_ref, output%density, output%velocity, output%temperature
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine writeSpeciesOutput
|
|
||||||
|
|
||||||
subroutine writeCollOutput(self, fileID)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleCollisions
|
|
||||||
use moduleRefParam, only: L_ref
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshGeneric), intent(in):: self
|
|
||||||
integer, intent(in):: fileID
|
|
||||||
integer:: n, k, c
|
|
||||||
|
|
||||||
do n = 1, self%numCells
|
|
||||||
write(fileID, '(I0)', advance='no') n
|
|
||||||
|
|
||||||
do k = 1, nCollPairs
|
|
||||||
do c = 1, interactionMatrix(k)%amount
|
|
||||||
write(fileID, '(",",I0)', advance='no') self%cells(n)%obj%tallyColl(k)%tally(c)
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end do
|
|
||||||
write(fileID, *)
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine writeCollOutput
|
|
||||||
|
|
||||||
subroutine writeEMOutput(self, fileID)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleRefParam, only: L_ref, Volt_ref, B_ref, EF_ref
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), intent(in):: self
|
|
||||||
integer, intent(in):: fileID
|
|
||||||
integer:: n, c
|
|
||||||
real(8):: r(1:3), Xi(1:3)
|
|
||||||
|
|
||||||
do n = 1, self%numNodes
|
|
||||||
r = self%nodes(n)%obj%getCoordinates()
|
|
||||||
if (n == self%numNodes) then
|
|
||||||
Xi = (/ 1.D0, 0.D0, 0.D0 /)
|
|
||||||
c = self%numNodes - 1
|
|
||||||
|
|
||||||
else
|
|
||||||
Xi = (/ 0.D0, 0.D0, 0.D0 /)
|
|
||||||
c = n
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
associate(output => self%nodes(n)%obj%emData)
|
|
||||||
write(fileID, '(7(ES0.6E3,","),ES0.6E3)') r(1)*L_ref, &
|
|
||||||
output%phi*Volt_ref, &
|
|
||||||
self%cells(c)%obj%gatherElectricField(Xi)*EF_ref, &
|
|
||||||
output%B*B_ref
|
|
||||||
|
|
||||||
end associate
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine writeEMOutput
|
|
||||||
|
|
||||||
subroutine writeAverage(self, fileIDMean, &
|
|
||||||
fileIDDeviation, &
|
|
||||||
speciesIndex)
|
|
||||||
|
|
||||||
use moduleMesh
|
|
||||||
use moduleOutput
|
|
||||||
use moduleAverage
|
|
||||||
use moduleRefParam, only: L_ref
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), intent(in):: self
|
|
||||||
integer, intent(in):: fileIDMean, fileIDDeviation
|
|
||||||
INTEGER, intent(in):: speciesIndex
|
|
||||||
real(8):: r(1:3)
|
|
||||||
type(outputFormat):: outputMean
|
|
||||||
type(outputFormat):: outputDeviation
|
|
||||||
integer:: n
|
|
||||||
|
|
||||||
do n = 1, self%numNodes
|
|
||||||
r = self%nodes(n)%obj%getCoordinates()
|
|
||||||
|
|
||||||
call calculateOutput(averageScheme(n)%mean%output(speciesIndex), outputMean, &
|
|
||||||
self%nodes(n)%obj%v, species(speciesIndex)%obj)
|
|
||||||
|
|
||||||
write(fileIDMean, '(5(ES0.6E3,","),ES0.6E3)') r(1)*L_ref, outputMean%density, outputMean%velocity, outputMean%temperature
|
|
||||||
|
|
||||||
call calculateOutput(averageScheme(n)%deviation%output(speciesIndex), outputDeviation, &
|
|
||||||
self%nodes(n)%obj%v, species(speciesIndex)%obj)
|
|
||||||
|
|
||||||
write(fileIDDeviation, '(5(ES0.6E3,","),ES0.6E3)') r(1)*L_ref, outputDeviation%density, outputDeviation%velocity, outputDeviation%temperature
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine writeAverage
|
|
||||||
|
|
||||||
subroutine printOutputText(self)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleSpecies
|
|
||||||
use moduleMeshInoutCommon
|
|
||||||
use moduleCaseParam, ONLY: timeStep
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), intent(in):: self
|
|
||||||
|
|
||||||
INTEGER:: s, fileID
|
|
||||||
character(:), allocatable:: fileName
|
|
||||||
|
|
||||||
fileID = 60
|
|
||||||
|
|
||||||
do s = 1, nSpecies
|
|
||||||
fileName = formatFileName(prefix, species(s)%obj%name, 'csv', timeStep)
|
|
||||||
write(*, "(6X,A15,A)") "Creating file: ", fileName
|
|
||||||
open (fileID, file = path // folder // '/' // fileName)
|
|
||||||
|
|
||||||
write(fileID, '(5(A,","),A)') 'Position (m)', &
|
|
||||||
'Density (m^-3)', &
|
|
||||||
'Velocity (m s^-1):0', 'Velocity (m s^-1):1', 'Velocity (m s^-1):2', &
|
|
||||||
'Temperature (K)'
|
|
||||||
|
|
||||||
call writeSpeciesOutput(self, fileID, s)
|
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine printOutputText
|
|
||||||
|
|
||||||
subroutine printCollText(self)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleOutput
|
|
||||||
use moduleMeshInoutCommon
|
|
||||||
use moduleCaseParam, only: timeStep
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshGeneric), intent(in):: self
|
|
||||||
integer:: fileID
|
|
||||||
character(:), allocatable:: fileName
|
|
||||||
integer:: k, c
|
|
||||||
character (len=2):: cString
|
|
||||||
|
|
||||||
fileID = 62
|
|
||||||
|
|
||||||
if (collOutput) then
|
|
||||||
fileName = formatFileName(prefix, 'Collisions', 'csv', timeStep)
|
|
||||||
write(*, "(6X,A15,A)") "Creating file: ", fileName
|
|
||||||
open (fileID, file = path // folder // '/' // fileName)
|
|
||||||
|
|
||||||
write(fileID, '(A)', advance='no') "Cell"
|
|
||||||
do k = 1, nCollPairs
|
|
||||||
do c = 1, interactionMatrix(k)%amount
|
|
||||||
write(cString, "(I2)") c
|
|
||||||
write(fileID, '(",",A)', advance='no') 'Pair ' // interactionMatrix(k)%sp_i%name // '-' // interactionMatrix(k)%sp_j%name // ' collision ' // cString
|
|
||||||
|
|
||||||
end do
|
|
||||||
end do
|
|
||||||
|
|
||||||
write(fileID, *)
|
|
||||||
|
|
||||||
call writeCollOutput(self, fileID)
|
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
end subroutine printCollText
|
|
||||||
|
|
||||||
subroutine printEMText(self)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleMeshInoutCommon
|
|
||||||
use moduleCaseParam, only: timeStep
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), intent(in):: self
|
|
||||||
integer:: fileID
|
|
||||||
character(:), allocatable:: fileName
|
|
||||||
|
|
||||||
fileID = 64
|
|
||||||
|
|
||||||
if (emOutput) then
|
|
||||||
fileName = formatFileName(prefix, 'EMField', 'csv', timeStep)
|
|
||||||
write(*, "(6X,A15,A)") "Creating file: ", fileName
|
|
||||||
open (fileID, file = path // folder // '/' // fileName)
|
|
||||||
|
|
||||||
write(fileID, '(8(A,","),A)') 'Position (m)', &
|
|
||||||
'Potential (V)', &
|
|
||||||
'Electric Field (V m^-1):0', 'Electric Field (V m^-1):1', 'Electric Field (V m^-1):2', &
|
|
||||||
'Magnetic Field (T):0', 'Magnetic Field (T):1', 'Magnetic Field (T):2'
|
|
||||||
|
|
||||||
call writeEMOutput(self, fileID)
|
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
end if
|
|
||||||
|
|
||||||
end subroutine printEMText
|
|
||||||
|
|
||||||
subroutine printAverageText(self)
|
|
||||||
use moduleMesh
|
|
||||||
use moduleSpecies
|
|
||||||
use moduleMeshInoutCommon
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
class(meshParticles), intent(in):: self
|
|
||||||
integer:: s
|
|
||||||
integer:: fileIDMean, fileIDDeviation
|
|
||||||
character(:), allocatable:: fileNameMean, fileNameDeviation
|
|
||||||
|
|
||||||
fileIDMean = 66
|
|
||||||
fileIDDeviation = 67
|
|
||||||
|
|
||||||
do s = 1, nSpecies
|
|
||||||
fileNameMean = formatFileName('Average_mean', species(s)%obj%name, 'csv', timeStep)
|
|
||||||
write(*, "(6X,A15,A)") "Creating file: ", fileNameMean
|
|
||||||
open (fileIDMean, file = path // folder // '/' // fileNameMean)
|
|
||||||
|
|
||||||
write(fileIDMean, '(5(A,","),A)') 'Position (m)', &
|
|
||||||
'Density, mean (m^-3)', &
|
|
||||||
'Velocity, mean (m s^-1):0', 'Velocity (m s^-1):1', 'Velocity (m s^-1):2', &
|
|
||||||
'Temperature, mean (K)'
|
|
||||||
|
|
||||||
fileNameDeviation = formatFileName('Average_deviation', species(s)%obj%name, 'csv', timeStep)
|
|
||||||
write(*, "(6X,A15,A)") "Creating file: ", fileNameDeviation
|
|
||||||
open (fileIDDeviation, file = path // folder // '/' // fileNameDeviation)
|
|
||||||
|
|
||||||
write(fileIDDeviation, '(5(A,","),A)') 'Position (m)', &
|
|
||||||
'Density, deviation (m^-3)', &
|
|
||||||
'Velocity, deviation (m s^-1):0', 'Velocity (m s^-1):1', 'Velocity (m s^-1):2', &
|
|
||||||
'Temperature, deviation (K)'
|
|
||||||
|
|
||||||
call writeAverage(self, fileIDMean, fileIDDeviation, s)
|
|
||||||
|
|
||||||
close(fileIDMean)
|
|
||||||
close(fileIDDeviation)
|
|
||||||
|
|
||||||
end do
|
|
||||||
|
|
||||||
end subroutine printAverageText
|
|
||||||
|
|
||||||
end module moduleMeshOutputText
|
|
||||||
|
|
@ -548,8 +548,6 @@ MODULE moduleMeshInputVTU
|
||||||
CALL readDataBlock(fileID, numNodes, temperature)
|
CALL readDataBlock(fileID, numNodes, temperature)
|
||||||
REWIND(fileID)
|
REWIND(fileID)
|
||||||
|
|
||||||
close(fileID)
|
|
||||||
|
|
||||||
END SUBROUTINE readInitialVTU
|
END SUBROUTINE readInitialVTU
|
||||||
|
|
||||||
END MODULE moduleMeshInputVTU
|
END MODULE moduleMeshInputVTU
|
||||||
|
|
|
||||||
|
|
@ -11,7 +11,7 @@ MODULE moduleMeshOutputVTU
|
||||||
|
|
||||||
WRITE(fileID,"(A)") '<?xml version="1.0"?>'
|
WRITE(fileID,"(A)") '<?xml version="1.0"?>'
|
||||||
WRITE(fileID,"(2X, A)") '<VTKFile type="UnstructuredGrid">'
|
WRITE(fileID,"(2X, A)") '<VTKFile type="UnstructuredGrid">'
|
||||||
WRITE(fileID,"(4X, A)") '<UnstructuredGrid>'
|
WRITE(fileID,"(4X, A,ES20.6E3,A)") '<UnstructuredGrid>'
|
||||||
WRITE(fileID,"(6X, A, I10, A, I10, A)") '<Piece NumberOfPoints="', nNodes, '" NumberOfCells="', nCells, '">'
|
WRITE(fileID,"(6X, A, I10, A, I10, A)") '<Piece NumberOfPoints="', nNodes, '" NumberOfCells="', nCells, '">'
|
||||||
|
|
||||||
END SUBROUTINE writeHeader
|
END SUBROUTINE writeHeader
|
||||||
|
|
|
||||||
|
|
@ -499,17 +499,18 @@ MODULE moduleMesh
|
||||||
IMPLICIT NONE
|
IMPLICIT NONE
|
||||||
|
|
||||||
CLASS(meshParticles), INTENT(inout):: self
|
CLASS(meshParticles), INTENT(inout):: self
|
||||||
INTEGER:: c
|
INTEGER:: e
|
||||||
|
INTEGER:: nNodes
|
||||||
INTEGER, ALLOCATABLE:: n(:)
|
INTEGER, ALLOCATABLE:: n(:)
|
||||||
REAL(8), ALLOCATABLE:: localK(:,:)
|
REAL(8), ALLOCATABLE:: localK(:,:)
|
||||||
INTEGER:: i, j
|
INTEGER:: i, j
|
||||||
|
|
||||||
DO c = 1, self%numCells
|
DO e = 1, self%numCells
|
||||||
associate(nNodes => self%cells(c)%obj%nNodes)
|
nNodes = self%cells(e)%obj%nNodes
|
||||||
ALLOCATE(n(1:nNodes))
|
ALLOCATE(n(1:nNodes))
|
||||||
ALLOCATE(localK(1:nNodes, 1:nNodes))
|
ALLOCATE(localK(1:nNodes, 1:nNodes))
|
||||||
n = self%cells(c)%obj%getNodes(nNodes)
|
n = self%cells(e)%obj%getNodes(nNodes)
|
||||||
localK = self%cells(c)%obj%elemK(nNodes)
|
localK = self%cells(e)%obj%elemK(nNodes)
|
||||||
|
|
||||||
DO i = 1, nNodes
|
DO i = 1, nNodes
|
||||||
DO j = 1, nNodes
|
DO j = 1, nNodes
|
||||||
|
|
@ -521,8 +522,6 @@ MODULE moduleMesh
|
||||||
|
|
||||||
DEALLOCATE(n, localK)
|
DEALLOCATE(n, localK)
|
||||||
|
|
||||||
end associate
|
|
||||||
|
|
||||||
END DO
|
END DO
|
||||||
|
|
||||||
END SUBROUTINE constructGlobalK
|
END SUBROUTINE constructGlobalK
|
||||||
|
|
|
||||||
Loading…
Add table
Add a link
Reference in a new issue