Add BC plotting routine

moduleOutput.f90

@@ -146,9 +146,9 @@ module output
         write(dataPhi_id, '('//formatFloat//')') t*dt*t_ref
         write(dataPhi_id, '(A)') "Z"
         write(dataPhi_id, '('//formatFloat//')') Z_list(j)
-        write(dataPhi_id, '(A,4('//formatSep//',A))') "r (m)","n_i (m^-3)","u_i (m s^-1)", "T_i (eV)"
+        write(dataPhi_id, '(A,3('//formatSep//',A))') "r (m)","n_i (m^-3)","u_i (m s^-1)", "T_i (eV)"
         do i = 1, nr
-          write(dataPhi_id, '('//formatFloat//',4('//formatSep //','//formatFloat//'))') &
+          write(dataPhi_id, '('//formatFloat//',3('//formatSep //','//formatFloat//'))') &
                             r(i)*L_ref,                                                  &
                             n_i(j,i)*n_ref,                                                &
                             u_i(j,i)*u_ref,                                                &
@@ -160,13 +160,13 @@ module output
       end do
     end subroutine writeOutputMom
 
-    subroutine writeOutputBoundary(t, dt, n, u, Temp, Z)
+    subroutine writeOutputBoundary(t, dt, n, u, Temp, TtoZ, Zinj)
       use constantParameters, only: eV_to_K
       use referenceValues,    only: t_ref, n_ref, u_ref, Temp_ref
 
       integer, intent(in):: t
       real(dp), intent(in):: dt
-      real(dp), intent(in):: n, u, Temp, Z
+      real(dp), intent(in):: n, u, Temp, TtoZ, Zinj
       character(len=6), parameter:: filename = 'bc.csv'
       logical:: res
 
@@ -174,14 +174,14 @@ module output
       if (.not. res) then
         write (*, '(A, A)') 'Writing: ', filename
         open(unit=dataBC_id, file=pathOutput // filename, action='write', position='append')
-        write(dataBC_id, '(A,4(' // formatSep // ',A))') 't (s)', 'n (m^-3)', 'u (m s^-1)', 'T (eV)', 'Z'
+        write(dataBC_id, '(A,5(' // formatSep // ',A))') 't (s)', 'n (m^-3)', 'u (m s^-1)', 'T (eV)', 'TtoZ','Zinj'
         close(dataBC_id)
 
       end if
 
       open(unit=dataBC_id, file=pathOutput // filename, action='write', position='append')
-      write(dataBC_id, '(' // formatFloat // ',4('// formatSep // ',' // formatFloat // '))') &
+      write(dataBC_id, '(' // formatFloat // ',5('// formatSep // ',' // formatFloat // '))') &
-                        t*dt*t_ref,  n*n_ref, u*u_ref, Temp*Temp_ref/eV_to_K, Z
+                        t*dt*t_ref,  n*n_ref, u*u_ref, Temp*Temp_ref/eV_to_K, TtoZ, Zinj
 
       close(dataBC_id)
 

scripts_python/plotBC.py

@@ -0,0 +1,19 @@
+import matplotlib.pyplot as plt
+import glob
+import numpy as np
+import readBC
+
+
+fileBC = glob.glob('../2025-02-10_11.14.59/bc.csv')
+time, n, u, T, TtoZ, Zinj = readBC.read(fileBC[0])
+
+fig, ax = plt.subplots()
+
+
+plt.plot(time, n / n[0] , label = f"$n_i$ ($\\times {n[0] * 1e-6} \\; cm^{{-3}})$")
+plt.plot(time, T / T[0], label = f"$T  \\; (\\times{T[0]} \\; eV)$")
+plt.plot(time, TtoZ, label = "$Z$")
+plt.plot(time, Zinj, label = "Injection species")
+plt.semilogy()
+plt.legend()
+plt.show()

scripts_python/readBC.py

@@ -0,0 +1,15 @@
+import pandas
+
+def read(filename):
+    # Get time
+    df = pandas.read_csv(filename)
+    time = df['t (s)'].to_numpy()
+    n = df['n (m^-3)'].to_numpy()
+    u = df['u (m s^-1)'].to_numpy()
+    T = df['T (eV)'].to_numpy()
+    TtoZ = df['TtoZ'].to_numpy()
+    Zinj = df['Zinj'].to_numpy()
+
+    return time, n, u, T, TtoZ, Zinj
+
+